RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 RNF144BQ7Z419 303 aa12.59□□□□□ -0.39
PTPN21-201ENST00000328736 TRPT1Q86TN4 253 aaKnown RBP12.59□□□□□ -0.39
PTPN21-201ENST00000328736 BMPERQ8N8U9 685 aa12.59□□□□□ -0.39
PTPN21-201ENST00000328736 MBD3L2Q8NHZ7 208 aaPredicted RBP12.59□□□□□ -0.39
PTPN21-201ENST00000328736 ZNF48Q96MX3 618 aaPredicted RBP12.59□□□□□ -0.39
PTPN21-201ENST00000328736 TRAV13-1A0A0B4J241 112 aa12.59□□□□□ -0.39
PTPN21-201ENST00000328736 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
PTPN21-201ENST00000328736 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
PTPN21-201ENST00000328736 A0A1B0GW64 132 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BKO60814 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BJP06899 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BOP23527 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BBP33778 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BDP58876 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BCP62807 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.39
PTPN21-201ENST00000328736 C14orf178Q8N769 122 aaPredicted RBP12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.39
PTPN21-201ENST00000328736 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
PTPN21-201ENST00000328736 E9PQ18 207 aa12.58□□□□□ -0.4
PTPN21-201ENST00000328736 H0YIZ8 118 aa12.58□□□□□ -0.4
PTPN21-201ENST00000328736 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
PTPN21-201ENST00000328736 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
PTPN21-201ENST00000328736 PRIMA1Q86XR5 153 aa12.58□□□□□ -0.4
PTPN21-201ENST00000328736 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
PTPN21-201ENST00000328736 LINC01619G3V211 115 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 DAD1P61803 113 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 BCL6BQ8N143 479 aaPredicted RBP12.57□□□□□ -0.4
PTPN21-201ENST00000328736 AGMATQ9BSE5 352 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 PRTN3P24158 256 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 ZNF329Q86UD4 541 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 MDS2Q8NDY4 140 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 DLX4Q92988 240 aaPredicted RBP12.57□□□□□ -0.4
PTPN21-201ENST00000328736 TRBV24-1A0A075B6N3 115 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 TRBV6-6A0A0A6YYG2 114 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 PSPNO60542 156 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 CLPSP04118 112 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 Q8TAT8 98 aa12.57□□□□□ -0.4
PTPN21-201ENST00000328736 RMI2Q96E14 147 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 RHODO00212 210 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 SP5Q6BEB4 398 aaPredicted RBP12.56□□□□□ -0.4
PTPN21-201ENST00000328736 Q0VFX4 171 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 SNHG12Q9BXW3 62 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 ZNF581Q9P0T4 197 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 IGKV1-27A0A075B6S5 117 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 GAS1P54826 345 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 SYNJ2BPP57105 145 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 NUP35Q8NFH5 326 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 TMEM158Q8WZ71 300 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 BPESC1Q9GZL8 116 aa12.56□□□□□ -0.4
PTPN21-201ENST00000328736 FNDC10F2Z333 226 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 SAA4P35542 130 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 NKAPP1Q8N9T2 125 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 TMEM126AQ9H061 195 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 HEATR5BQ9P2D3 2071 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 NMSQ5H8A3 153 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 MCRIP2Q9BUT9 160 aaKnown RBP12.55□□□□□ -0.4
PTPN21-201ENST00000328736 LIME1Q9H400 295 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 TRAV3A0A0B4J244 114 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 UBE2CO00762 179 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 DEFB131AP59861 70 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 GUSBP1Q15486 140 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 COL8A2P25067 703 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 MSMBP08118 114 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 TMEM14EPQ6UXP3 125 aa12.55□□□□□ -0.4
PTPN21-201ENST00000328736 A0A087WWL8 130 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 F5H768 121 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 APOC4P55056 127 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 LHFPL1Q86WI0 220 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 TRBV25-1A0A075B6N4 114 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 TRAV8-3A0A0A6YYJ7 113 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 PDE6HQ13956 83 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 OVOL3O00110 214 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 HIST1H2BLQ99880 126 aa12.54□□□□□ -0.4
PTPN21-201ENST00000328736 DNAJC13O75165 2243 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 LINC01551Q86U37 167 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 SPXQ9BT56 116 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 GFRA4Q9GZZ7 299 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 H3BMM0 161 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 NEGR1Q7Z3B1 354 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 DMRTC2Q8IXT2 367 aaPredicted RBP12.53□□□□□ -0.4
PTPN21-201ENST00000328736 CACNA1IQ9P0X4 2223 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 RNF223E7ERA6 249 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 OCIAD2Q56VL3 154 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 Q5PR19 223 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 IGHG3P01860 377 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 Q6P435 159 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 FAM110DQ8TAY7 271 aaPredicted RBP12.53□□□□□ -0.4
PTPN21-201ENST00000328736 SHANK2-AS3Q9BTD1 123 aa12.53□□□□□ -0.4
PTPN21-201ENST00000328736 IGKV1-5P01602 117 aa12.52□□□□□ -0.4
PTPN21-201ENST00000328736 Q6ZS92 163 aa12.52□□□□□ -0.4
PTPN21-201ENST00000328736 MRPL27Q9P0M9 148 aaKnown RBP12.52□□□□□ -0.4
PTPN21-201ENST00000328736 GAGE2AQ6NT46 116 aa12.52□□□□□ -0.41
PTPN21-201ENST00000328736 LOC105371267A0A1B0GV96 52 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms