RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 ZNF600Q6ZNG1 722 aa12.2□□□□□ -0.46
CALR-201ENST00000316448 TXN2Q99757 166 aa12.2□□□□□ -0.46
CALR-201ENST00000316448 SHANK2-AS3Q9BTD1 123 aa12.2□□□□□ -0.46
CALR-201ENST00000316448 BIN3Q9NQY0 253 aa12.2□□□□□ -0.46
CALR-201ENST00000316448 AP4M1O00189 453 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 CLEC3BP05452 202 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 S100PP25815 95 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 GPR183P32249 361 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 GNG4P50150 75 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 IMMP2LQ96T52 175 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 CDC42EP3Q9UKI2 254 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 NOTCH2Q04721 2471 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 IGHV3-35A0A0C4DH35 117 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 PEX7O00628 323 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
CALR-201ENST00000316448 TRGV3P03979 118 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 IL4P05112 153 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 USF2Q15853 346 aaPredicted RBP12.19□□□□□ -0.46
CALR-201ENST00000316448 CLEC19AQ6UXS0 136 aa12.19□□□□□ -0.46
CALR-201ENST00000316448 TGOLN2O43493 480 aa12.18□□□□□ -0.46
CALR-201ENST00000316448 IGLV1-40P01703 118 aa12.18□□□□□ -0.46
CALR-201ENST00000316448 HNF1AP20823 631 aa12.18□□□□□ -0.46
CALR-201ENST00000316448 ATP5G2Q06055 141 aa12.18□□□□□ -0.46
CALR-201ENST00000316448 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 TAS2R60P59551 318 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 RANP62826 216 aaKnown RBP12.17□□□□□ -0.46
CALR-201ENST00000316448 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 SAV1Q9H4B6 383 aaPredicted RBP12.17□□□□□ -0.46
CALR-201ENST00000316448 IGHV3OR16-8A0A075B7F1 116 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 PHOX2AO14813 284 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 SCGB2A1O75556 95 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 BRI3O95415 125 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 TPPP2P59282 170 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 EEF1AKMT3Q96AZ1 226 aa12.17□□□□□ -0.46
CALR-201ENST00000316448 C5orf52A6NGY3 159 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 TYMSP04818 313 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 HIST1H1EP10412 219 aaKnown RBP12.16□□□□□ -0.46
CALR-201ENST00000316448 PF4V1P10720 104 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 CNN1P51911 297 aaKnown RBP12.16□□□□□ -0.46
CALR-201ENST00000316448 FOXL1Q12952 345 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 KCNIP4Q6PIL6 250 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 OR10G8Q8NGN5 311 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 ESM1Q9NQ30 184 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 ZNF586Q9NXT0 402 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 ZNF580Q9UK33 172 aa12.16□□□□□ -0.46
CALR-201ENST00000316448 A0A1W2PPQ1 181 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 FAM223BA6NKX1 122 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 PPP5D1E7EU14 171 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 MRPS12O15235 138 aaKnown RBP12.15□□□□□ -0.46
CALR-201ENST00000316448 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 S100A7AQ86SG5 101 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 BPIFA4PQ86YQ2 179 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 C5orf17Q8NAS9 161 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 TMEM190Q8WZ59 177 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 Q9H3A6 140 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 EPDR1Q9UM22 224 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 TRBV7-1A0A0A6YYK4 115 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 H3BUA1 57 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 LY6G6DO95868 133 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 GCGP01275 180 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 IGHV3-11P01762 117 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 TRGC2P03986 189 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 TEX29Q8N6K0 151 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 ATG101Q9BSB4 218 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 PRSS22Q9GZN4 317 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 KLF12Q9Y4X4 402 aa12.15□□□□□ -0.46
CALR-201ENST00000316448 PGPA6NDG6 321 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 ZNF98A6NK75 572 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 ISLRO14498 428 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 SLC25A5P05141 298 aaKnown RBP12.14□□□□□ -0.47
CALR-201ENST00000316448 RAB9AP51151 201 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 GNG5P63218 68 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 OR5I1Q13606 314 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 TOMM20LQ6UXN7 152 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 ZFAND3Q9H8U3 227 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 OTORQ9NRC9 128 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 RNF24Q9Y225 148 aa12.14□□□□□ -0.47
CALR-201ENST00000316448 OTOGQ6ZRI0 2925 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 TRBV19A0A075B6N1 114 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 H3BTX0 84 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 UBE2CO00762 179 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 IGHG4P01861 327 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 S100A6P06703 90 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 FAM3BP58499 235 aaPredicted RBP12.13□□□□□ -0.47
CALR-201ENST00000316448 SNRPEP62304 92 aaKnown RBP12.13□□□□□ -0.47
CALR-201ENST00000316448 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 V9GYV3 84 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 CUBNO60494 3623 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 HIST1H2BKO60814 126 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 HIST1H2BJP06899 126 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 HIST1H2BOP23527 126 aa12.13□□□□□ -0.47
CALR-201ENST00000316448 PSMB8P28062 276 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms