RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BLNKQ8WV28 456 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 NEU4Q8WWR8 484 aaPredicted RBP6.06□□□□□ -1.44
TRIM55-202ENST00000315962 SLC35E1Q96K37 410 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 BET1LQ9NYM9 111 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 TECRQ9NZ01 308 aaKnown RBP6.06□□□□□ -1.44
TRIM55-202ENST00000315962 LSM4Q9Y4Z0 139 aaKnown RBP6.06□□□□□ -1.44
TRIM55-202ENST00000315962 CREBBPQ92793 2442 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 CCL25O15444 150 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 LINC00869P0C866 280 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF138P52744 262 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 EFNA4P52798 201 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 UBE2L3P68036 154 aaKnown RBP6.05□□□□□ -1.44
TRIM55-202ENST00000315962 ERHP84090 104 aaKnown RBP6.05□□□□□ -1.44
TRIM55-202ENST00000315962 VMA21Q3ZAQ7 101 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 KCNS1Q96KK3 526 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 SLC25A33Q9BSK2 321 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 SIGLEC9Q9Y336 463 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF324O75467 553 aaPredicted RBP6.05□□□□□ -1.44
TRIM55-202ENST00000315962 IGLC2P0DOY2 106 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 IGLC3P0DOY3 106 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 ORM2P19652 201 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 S100A7P31151 101 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 ATP5J2P56134 94 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 RBX1P62877 108 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 COL5A1-AS1Q5SY13 56 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 FAM120AOSQ5T036 256 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 TCF24Q7RTU0 167 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 OR2D3Q8NGH3 330 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 OR5B3Q8NH48 314 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 CCL19Q99731 98 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 SNAI2O43623 268 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 IGLV2-8P01709 118 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 APCSP02743 223 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 MC5RP33032 325 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 ETFRF1Q6IPR1 90 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 EBLN2Q6P2I7 272 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF596Q8TC21 504 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 DPM3Q9P2X0 92 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 LINC00527Q9UJ94 153 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 LAMTOR2Q9Y2Q5 125 aa6.05□□□□□ -1.44
TRIM55-202ENST00000315962 MYO9AB2RTY4 2548 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 IGHV4-61A0A0C4DH41 118 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 FAM90A9PA6NNJ1 464 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 M0R2Z0 102 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 ISLRO14498 428 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 HSBP1O75506 76 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 CX3CL1P78423 397 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 POU2AF1Q16633 256 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 TMEM219Q86XT9 240 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 TMEM167AQ8TBQ9 72 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 TNFRSF14Q92956 283 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 BORCS7Q96B45 105 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 RNF2Q99496 336 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 ABCA2Q9BZC7 2435 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 hDV102S1A0JD36 115 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 M0QZK8 103 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 MPDU1O75352 247 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 BMI1P35226 326 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 CTRLP40313 264 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 PRR20EP86478 221 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 PRR20CP86479 221 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 PRR20DP86480 221 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 PRR20BP86481 221 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 PRR20AP86496 221 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF843Q8N446 348 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 LINC00311Q8N616 119 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 LY6G5BQ8NDX9 201 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 OR4B1Q8NGF8 309 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 C18orf32Q8TCD1 76 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF257Q9Y2Q1 563 aa6.04□□□□□ -1.44
TRIM55-202ENST00000315962 IGHV4-30-2A0A087WSY4 118 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 IGLC7A0M8Q6 106 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 VWC2LB2RUY7 222 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 CSN3P07498 182 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 RPL27AP46776 148 aaKnown RBP6.03□□□□□ -1.44
TRIM55-202ENST00000315962 LMO4P61968 165 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 SRSF1Q07955 248 aaKnown RBP eCLIP6.03□□□□□ -1.44
TRIM55-202ENST00000315962 RAB31Q13636 194 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 PIP4P2Q8N4L2 257 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 VSTM2AQ8TAG5 236 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 SRSF12Q8WXF0 261 aaKnown RBP6.03□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF331Q9NQX6 463 aaPredicted RBP6.03□□□□□ -1.44
TRIM55-202ENST00000315962 TNFRSF19Q9NS68 423 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 C20orf202A1L168 122 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 LY6LH3BQJ8 138 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 MT-CO2P00403 227 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 AMY1AP04745 511 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 IGLL1P15814 213 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 PRTN3P24158 256 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 SAA4P35542 130 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 KRTAP10-9P60411 292 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 CD69Q07108 199 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 GNB1LQ9BYB4 327 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 UQCR10Q9UDW1 63 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 ZFP30Q9Y2G7 519 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 MTORP42345 2549 aa6.03□□□□□ -1.44
TRIM55-202ENST00000315962 LINC01548A6NM66 108 aa6.02□□□□□ -1.45
TRIM55-202ENST00000315962 HOXB4P17483 251 aaPredicted RBP6.02□□□□□ -1.45
TRIM55-202ENST00000315962 TSPOP30536 169 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms