RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 MFAP4P55083 255 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 DLX1P56177 255 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 HES1Q14469 280 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 PMCHL1Q16048 86 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 C5orf64Q2M2E5 130 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 RUSC1-AS1Q66K80 236 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 CFHR4Q92496 578 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 HILPDAQ9Y5L2 63 aa11.8□□□□□ -0.52
CHFR-202ENST00000315585 A0A1B0GV90 55 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 H3BRN7 92 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 GNG7O60262 68 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 CAMPP49913 170 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 PDE6HQ13956 83 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 KLHDC1Q8N7A1 406 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 TMEM75Q8N9X5 138 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 RNF125Q96EQ8 232 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 TRBV19A0A075B6N1 114 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 NPIPB6E9PJ23 425 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 OVOL3O00110 214 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 LEMD1Q68G75 181 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 ZNF705AQ6ZN79 300 aaPredicted RBP11.79□□□□□ -0.52
CHFR-202ENST00000315585 Q86TA4 180 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 ALKBH7Q9BT30 221 aaPredicted RBP11.79□□□□□ -0.52
CHFR-202ENST00000315585 FBXL7Q9UJT9 491 aa11.79□□□□□ -0.52
CHFR-202ENST00000315585 ABCA4P78363 2273 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 PLXNB1O43157 2135 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
CHFR-202ENST00000315585 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 RCHY1Q96PM5 261 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 GSX1Q9H4S2 264 aaPredicted RBP11.78□□□□□ -0.52
CHFR-202ENST00000315585 A0A1B0GW15 77 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 PRB3Q04118 309 aaPredicted RBP11.78□□□□□ -0.52
CHFR-202ENST00000315585 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 OR2D3Q8NGH3 330 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 SPOCK3Q9BQ16 436 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 AAMDCQ9H7C9 122 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 C1RLQ9NZP8 487 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 PAM16Q9Y3D7 125 aa11.78□□□□□ -0.52
CHFR-202ENST00000315585 ZZEF1O43149 2961 aa11.77□□□□□ -0.52
CHFR-202ENST00000315585 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.52
CHFR-202ENST00000315585 HOXB4P17483 251 aaPredicted RBP11.77□□□□□ -0.52
CHFR-202ENST00000315585 FOXA3P55318 350 aaPredicted RBP11.77□□□□□ -0.52
CHFR-202ENST00000315585 Q6AWC8 147 aa11.77□□□□□ -0.52
CHFR-202ENST00000315585 IGFBPL1Q8WX77 278 aa11.77□□□□□ -0.52
CHFR-202ENST00000315585 TPRP12270 2363 aaKnown RBP11.77□□□□□ -0.53
CHFR-202ENST00000315585 WI2-2373I1.2A0A1W2PRP0 233 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 CHEK1O14757 476 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 IL4P05112 153 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 CD33P20138 364 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 NTF3P20783 257 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 TTC9CQ8N5M4 171 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 ARPC1AQ92747 370 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
CHFR-202ENST00000315585 SGK494Q96LW2 274 aa11.77□□□□□ -0.53
CHFR-202ENST00000315585 NDUFS7O75251 213 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 IGLC2P0DOY2 106 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 CSN1S1P47710 185 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 NUTF2P61970 127 aaKnown RBP11.76□□□□□ -0.53
CHFR-202ENST00000315585 PRNTQ86SH4 94 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 ADGRG4Q8IZF6 3080 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 C20orf202A1L168 122 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 M0R2Z0 102 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 HLA-DRB1P01911 266 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 PSG9Q00887 426 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 TCF24Q7RTU0 167 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 NDFIP1Q9BT67 221 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 SNHG12Q9BXW3 62 aa11.76□□□□□ -0.53
CHFR-202ENST00000315585 ITPR1Q14643 2758 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 HAX1O00165 279 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 EBI3Q14213 229 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 PGLYRP4Q96LB8 373 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 TXN2Q99757 166 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
CHFR-202ENST00000315585 C3orf79P0CE67 100 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 CT45A10P0DMU9 189 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 FCGR2BP31994 310 aaPredicted RBP11.75□□□□□ -0.53
CHFR-202ENST00000315585 RIGQ13278 110 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 LDLRAD2Q5SZI1 272 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 GDF5OSQ5U4N7 250 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 VMO1Q7Z5L0 202 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 NIT1Q86X76 327 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 EXOC3-AS1Q8N2X6 119 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 CCL19Q99731 98 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
CHFR-202ENST00000315585 H3BTX0 84 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 FAM106CPP0CH98 169 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 RPL7P18124 248 aaKnown RBP11.74□□□□□ -0.53
CHFR-202ENST00000315585 BTF3P20290 206 aaKnown RBP11.74□□□□□ -0.53
CHFR-202ENST00000315585 PSG3Q16557 428 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
CHFR-202ENST00000315585 LHFPL4Q7Z7J7 247 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 GTSF1Q8WW33 167 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 UQCR10Q9UDW1 63 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 IGLV2-11P01706 119 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 Q56UQ5 140 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
CHFR-202ENST00000315585 LINC00322Q6ZN03 302 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms