RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 EFNA4P52798 201 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 LY6DQ14210 128 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 ORAOV1Q8WV07 137 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 CYSLTR1Q9Y271 337 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 OVOL1O14753 267 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
SPAST-201ENST00000315285 TOMM40O96008 361 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 LINC01587Q99440 93 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 M0R1W7 72 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 IGKCP01834 107 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 PLXNB3Q9ULL4 1909 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 SMAD7O15105 426 aaKnown RBP11.18□□□□□ -0.62
SPAST-201ENST00000315285 COL8A2P25067 703 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
SPAST-201ENST00000315285 PSG3Q16557 428 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 TYMSP04818 313 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 GATA4P43694 442 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 Q8TAT8 98 aa11.18□□□□□ -0.62
SPAST-201ENST00000315285 FNDC4Q9H6D8 234 aaPredicted RBP11.18□□□□□ -0.62
SPAST-201ENST00000315285 MED13LQ71F56 2210 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 DMRTC2Q8IXT2 367 aaPredicted RBP11.17□□□□□ -0.62
SPAST-201ENST00000315285 RPRMLQ8N4K4 120 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 JMJD8Q96S16 334 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 E7EQL1 145 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 SH2D1AO60880 128 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 LY6HO94772 140 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 SEC11AP67812 179 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 LDLRAD2Q5SZI1 272 aa11.17□□□□□ -0.62
SPAST-201ENST00000315285 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
SPAST-201ENST00000315285 IFI27P40305 119 aaPredicted RBP11.16□□□□□ -0.62
SPAST-201ENST00000315285 VCX2Q9H322 139 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.16□□□□□ -0.625e-6■■■■□ 22.8
SPAST-201ENST00000315285 Q86TA4 180 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 H3BRM9 83 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 HSD52Q0P140 79 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 NCOR1P1Q9H4R4 102 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 SRD5A1P18405 259 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 ZNF138P52744 262 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
SPAST-201ENST00000315285 PF4P02776 101 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 CYYR1Q96J86 154 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.62
SPAST-201ENST00000315285 hDV102S1A0JD36 115 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 C17orf58Q2M2W7 97 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 TMEM155Q4W5P6 130 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 Q8TCH9 128 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 Q0VG73 95 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 SMPXQ9UHP9 88 aa11.15□□□□□ -0.62
SPAST-201ENST00000315285 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.63
SPAST-201ENST00000315285 A0A1B0GUS0 222 aa11.15□□□□□ -0.63
SPAST-201ENST00000315285 SYS1-DBNDD2H3BUS1 97 aa11.15□□□□□ -0.63
SPAST-201ENST00000315285 ZNF124Q15973 351 aa11.15□□□□□ -0.63
SPAST-201ENST00000315285 LINC01559Q495D7 138 aa11.15□□□□□ -0.63
SPAST-201ENST00000315285 DUX4L9Q6RFH8 374 aaPredicted RBP11.15□□□□□ -0.63
SPAST-201ENST00000315285 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 DNAL4O96015 105 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 LAGE3Q14657 143 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 SHANK2-AS3Q9BTD1 123 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 Q8NFD4 153 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 SRSF8Q9BRL6 282 aaKnown RBP11.14□□□□□ -0.63
SPAST-201ENST00000315285 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
SPAST-201ENST00000315285 TMEM262E9PQX1 116 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 IGFL4Q6B9Z1 124 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 TTC32Q5I0X7 151 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 WFDC12Q8WWY7 111 aa11.14□□□□□ -0.63
SPAST-201ENST00000315285 GTF3C1Q12789 2109 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 NDUFS6O75380 124 aaKnown RBP11.13□□□□□ -0.63
SPAST-201ENST00000315285 IGHV2-5P01817 119 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 PRTN3P24158 256 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 FXYD7P58549 80 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 SFTA2Q6UW10 78 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 OR13C6PQ8NH95 151 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 DLEU1O43261 78 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 C3orf36Q3SXR2 165 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 RNF138Q8WVD3 245 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 NDPQ00604 133 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 ZNF833PQ6ZTB9 187 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 TRBV7-1A0A0A6YYK4 115 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
SPAST-201ENST00000315285 CFHR2P36980 270 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 TTC28Q96AY4 2481 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 A0A1W2PRX2 142 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 ZNF134P52741 427 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
SPAST-201ENST00000315285 BRD3OSQ6XYD6 125 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms