RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 IGKV2-40A0A087WW87 121 aaPredicted RBP9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 IGKV2D-40P01614 121 aaPredicted RBP9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 GLMPQ8WWB7 406 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 A6NDN8 102 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 C22orf46C9J442 243 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 ZNF25P17030 456 aaPredicted RBP9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 TDGF1P3P51864 188 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 ZNF56Q15929 161 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 ZNF502Q8TBZ5 544 aa9.18□□□□□ -0.94
PCDHGC3-201ENST00000308177 TRBV7-1A0A0A6YYK4 115 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 IGHV2-70DA0A0C4DH43 119 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 SCGB1C2P0DMR2 95 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 GZMBP10144 247 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 HINT1P49773 126 aaPredicted RBP9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 LYPD6BQ8NI32 183 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 SLC25A16P16260 332 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 REC114Q7Z4M0 266 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 LYPD1Q8N2G4 141 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 SHANK2-AS3Q9BTD1 123 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 YAE1D1Q9NRH1 226 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 M0R3E3 92 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 GUSBP1Q15486 140 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 ZNF329Q86UD4 541 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 C8orf31Q8N9H6 132 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 IGHV2-70P01814 119 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 C18orf15Q96N68 181 aa9.17□□□□□ -0.94
PCDHGC3-201ENST00000308177 J3QR89 54 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 ZNF324O75467 553 aaPredicted RBP9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 CEP295Q9C0D2 2601 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 NDUFS7O75251 213 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 AMBPP02760 352 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 MSMBP08118 114 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 PAX1P15863 534 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 PPIFP30405 207 aaKnown RBP9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 JOSD1Q15040 202 aaPredicted RBP9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 NUP210LQ5VU65 1888 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 OR10J3Q5JRS4 329 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 RUSC1-AS1Q66K80 236 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 C12orf54Q6X4T0 127 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 Q8NA96 180 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 PFN1P07737 140 aaKnown RBP9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 ACTL10Q5JWF8 245 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 ZNF418Q8TF45 676 aaPredicted RBP9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 VPS25Q9BRG1 176 aa9.16□□□□□ -0.94
PCDHGC3-201ENST00000308177 TRAV21A0A0B4J279 112 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 ATP6V0E1O15342 81 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 NDUFB8O95169 186 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 RRN3P1Q2M238 152 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 FBLN7Q53RD9 439 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 UQCRFS1P47985 274 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 PRDM13Q9H4Q3 707 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 PEMTQ9UBM1 199 aa9.15□□□□□ -0.94
PCDHGC3-201ENST00000308177 PPP1R17O96001 155 aa9.15□□□□□ -0.95
PCDHGC3-201ENST00000308177 YPEL3P61236 119 aaPredicted RBP9.15□□□□□ -0.95
PCDHGC3-201ENST00000308177 NDPQ00604 133 aa9.15□□□□□ -0.95
PCDHGC3-201ENST00000308177 NUP35Q8NFH5 326 aa9.15□□□□□ -0.95
PCDHGC3-201ENST00000308177 USMG5Q96IX5 58 aa9.15□□□□□ -0.95
PCDHGC3-201ENST00000308177 C7orf71A4D174 169 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 OVOL1O14753 267 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 LINC00614P0C842 121 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 SRD5A1P18405 259 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PRR20EP86478 221 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PRR20CP86479 221 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PRR20DP86480 221 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PRR20BP86481 221 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PRR20AP86496 221 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 IGHV1-69DA0A0B4J2H0 117 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 IGHV1-69P01742 117 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PSG3Q16557 428 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 FAM110DQ8TAY7 271 aaPredicted RBP9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 ITLN2Q8WWU7 325 aaPredicted RBP9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 TNCP24821 2201 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 GGTLC3B5MD39 225 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 VWC2Q2TAL6 325 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 IGFL4Q6B9Z1 124 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 SP5Q6BEB4 398 aaPredicted RBP9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 LINC01356Q8N9X3 169 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 Q8TAT8 98 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 A0A1W2PRX2 142 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 IGLV2-14P01704 120 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PF4P02776 101 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 NUTF2P61970 127 aaKnown RBP9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PDE6HQ13956 83 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 LCN12Q6JVE5 192 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 Q6ZPA2 131 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
PCDHGC3-201ENST00000308177 PSMB11A5LHX3 300 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 LDLRAD2Q5SZI1 272 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 TMEM256Q8N2U0 113 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 FAM223BA6NKX1 122 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 G3V318 75 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms