RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 BPIFA4PQ86YQ2 179 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 GAL3ST2Q9H3Q3 398 aa11.74□□□□□ -0.53
PTPN9-201ENST00000306726 PPIAL4EA0A075B759 164 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 C9JCJ5 164 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 IL4P05112 153 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 PRSS1P07477 247 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 PPIAL4FP0DN26 164 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 EVI2AP22794 236 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 SELENOTP62341 195 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 Q0VG73 95 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 ADTRPQ96IZ2 230 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 LINC00614P0C842 121 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 PATE2Q6UY27 113 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 ZNF329Q86UD4 541 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 C5orf17Q8NAS9 161 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 CCDC168Q8NDH2 2452 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 FAM90A27PA6NNH2 459 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 GCSHP23434 173 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 TMEM200BQ69YZ2 307 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 GRAMD2BQ96HH9 432 aa11.73□□□□□ -0.53
PTPN9-201ENST00000306726 RPP21Q9H633 154 aaKnown RBP11.73□□□□□ -0.53
PTPN9-201ENST00000306726 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
PTPN9-201ENST00000306726 A0A1W2PPI3 338 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 GAGE10A6NGK3 116 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 S100A7AQ86SG5 101 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 OR4C13Q8NGP0 309 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 RAB9BQ9NP90 201 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 COX11Q9Y6N1 276 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 GPR82Q96P67 336 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 BSPH1Q075Z2 132 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 TMEM75Q8N9X5 138 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 HIGD1AQ9Y241 93 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
PTPN9-201ENST00000306726 GLRXP35754 106 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.53
PTPN9-201ENST00000306726 UBE2V1Q13404 147 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 TWIST1Q15672 202 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 TMEM213A2RRL7 107 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 FAM106CPP0CH98 169 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 AARDQ4LEZ3 155 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 OR10J3Q5JRS4 329 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 TMEM108Q6UXF1 575 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 VKORC1Q9BQB6 163 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 SLC25A15Q9Y619 301 aa11.71□□□□□ -0.53
PTPN9-201ENST00000306726 VWC2LB2RUY7 222 aa11.71□□□□□ -0.54
PTPN9-201ENST00000306726 IGLV2-8P01709 118 aa11.71□□□□□ -0.54
PTPN9-201ENST00000306726 CD40P25942 277 aa11.71□□□□□ -0.54
PTPN9-201ENST00000306726 CACNG7P62955 275 aa11.71□□□□□ -0.54
PTPN9-201ENST00000306726 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 TRGV8A0A0C4DH27 118 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 IGHV1-24A0A0C4DH33 117 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 NPIPB5A8MRT5 1133 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 SYS1-DBNDD2H3BUS1 97 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 SAP30O75446 220 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 LINC01560Q8TB33 94 aa11.7□□□□□ -0.54
PTPN9-201ENST00000306726 C7orf71A4D174 169 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 GNG7O60262 68 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 IFI27P40305 119 aaPredicted RBP11.69□□□□□ -0.54
PTPN9-201ENST00000306726 GUSBP1Q15486 140 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 OR4F17Q8NGA8 305 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 IGKV2-40A0A087WW87 121 aaPredicted RBP11.69□□□□□ -0.54
PTPN9-201ENST00000306726 TCRBV4S1A1TA0A5B7 111 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 H0YJW9 148 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 IGKV2D-40P01614 121 aaPredicted RBP11.69□□□□□ -0.54
PTPN9-201ENST00000306726 EIF4EBP1Q13541 118 aaPredicted RBP11.69□□□□□ -0.54
PTPN9-201ENST00000306726 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 PNKDQ8N490 385 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 ARL3P36405 182 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
PTPN9-201ENST00000306726 MEGF9Q9H1U4 602 aa11.69□□□□□ -0.54
PTPN9-201ENST00000306726 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 PRSS46E5RG02 174 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 LY6DQ14210 128 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 GTSF1Q8WW33 167 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 K7EP13 123 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 CKS2P33552 79 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 FOXE3Q13461 319 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 FAM167A-AS1Q96KT0 104 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 NOTCH2Q04721 2471 aa11.68□□□□□ -0.54
PTPN9-201ENST00000306726 C8orf49Q96NF6 230 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 PLSCR4Q9NRQ2 329 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 C22orf46C9J442 243 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 F2RL2O00254 374 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 SCGB2A2Q13296 93 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 Q8N976 141 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 TMEM186Q96B77 213 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 LINC00527Q9UJ94 153 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 IGHV3OR16-10A0A075B7F0 116 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 D6R8Y8 96 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 PSG9Q00887 426 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 LOXL1Q08397 574 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms