RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 UBE2E2Q96LR5 201 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 RARRES2Q99969 163 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 TRAV9-2A0A087WT02 112 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 A8MXK9 166 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 TNFRSF13BO14836 293 aaPredicted RBP7.37□□□□□ -1.23
PTPRE-202ENST00000306042 APCSP02743 223 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 OR5AL1P0C617 328 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 PKIAP61925 76 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 GNG5P63218 68 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 FBLN7Q53RD9 439 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 VGLL1Q99990 258 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 ANAPC10Q9UM13 185 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 ATG2AQ2TAZ0 1938 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 C7orf77A4D0Y5 90 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 CXorf65A6NEN9 183 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 LGALS1P09382 135 aaKnown RBP7.36□□□□□ -1.23
PTPRE-202ENST00000306042 YPEL3P61236 119 aaPredicted RBP7.36□□□□□ -1.23
PTPRE-202ENST00000306042 EIF4E3Q8N5X7 224 aaKnown RBP7.36□□□□□ -1.23
PTPRE-202ENST00000306042 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
PTPRE-202ENST00000306042 EPDR1Q9UM22 224 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 A0A1W2PRE2 83 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 SRRM4A7MD48 611 aaKnown RBP7.36□□□□□ -1.23
PTPRE-202ENST00000306042 TLN2Q9Y4G6 2542 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 GRIFINA4D1Z8 144 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 INSP01308 110 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 CRISP2P16562 243 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 DEFB136Q30KP8 78 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 TOMM20LQ6UXN7 152 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 MGST2Q99735 147 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 ATP5G3P48201 142 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 WT1-ASQ06250 92 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 TTC9CQ8N5M4 171 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 AGMATQ9BSE5 352 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 PSG8Q9UQ74 426 aa7.36□□□□□ -1.23
PTPRE-202ENST00000306042 MYO9AB2RTY4 2548 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 SCO2A0A1W2PP80 73 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 KRTAP10-9P60411 292 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 KRTDAPP60985 99 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 NCKAP5O14513 1909 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 LOC389332A0A1B0GUA5 103 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 NMBP08949 121 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 HOXD3P31249 432 aaPredicted RBP7.35□□□□□ -1.23
PTPRE-202ENST00000306042 FXYD7P58549 80 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 C19orf54Q5BKX5 351 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 MYOZ3Q8TDC0 251 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 ARL2-SNX15V9GYD0 113 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 IGLV1-47P01700 117 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 TAS2R60P59551 318 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 C2CD4CQ8TF44 421 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 KIR2DL4Q99706 377 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 ARHGAP21Q5T5U3 1957 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 FNDC10F2Z333 226 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 MYCNOSP40205 109 aa7.35□□□□□ -1.23
PTPRE-202ENST00000306042 IGHV7-81A0A0B4J1V7 117 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 IGKV3OR2-268A0A0C4DH90 116 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 POU2AF1Q16633 256 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 REC114Q7Z4M0 266 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 MRAPQ8TCY5 172 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 ZFP30Q9Y2G7 519 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 WNK1Q9H4A3 2382 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 FSTL3O95633 263 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 C5orf56Q8N8D9 126 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 NPBQ8NG41 125 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 IGKV2-40A0A087WW87 121 aaPredicted RBP7.34□□□□□ -1.23
PTPRE-202ENST00000306042 IGKV2D-40P01614 121 aaPredicted RBP7.34□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM183BQ1AE95 376 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 ZNF841Q6ZN19 808 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM183AQ8IXX5 376 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 PUSL1Q8N0Z8 303 aaKnown RBP7.34□□□□□ -1.23
PTPRE-202ENST00000306042 EXOC3-AS1Q8N2X6 119 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 ISOC2Q96AB3 205 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 RMI2Q96E14 147 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 LINC00477Q96M19 166 aa7.34□□□□□ -1.23
PTPRE-202ENST00000306042 RNF224P0DH78 156 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 PRB4P10163 310 aaPredicted RBP7.33□□□□□ -1.24
PTPRE-202ENST00000306042 BATFQ16520 125 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 C19orf35Q6ZS72 473 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 HAPLN4Q86UW8 402 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 CHD3Q12873 2000 aaKnown RBP7.33□□□□□ -1.24
PTPRE-202ENST00000306042 Q8N9W7 124 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 FER1L6-AS1Q8NA97 138 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 ST6GALNAC6Q969X2 333 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 SHANK2-AS3Q9BTD1 123 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 ZNF138P52744 262 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 ZNF506Q5JVG8 444 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 SEPSECSQ9HD40 501 aaKnown RBP7.33□□□□□ -1.24
PTPRE-202ENST00000306042 MUC21A0A0G2JKD1 596 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 PSCAO43653 123 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 BTF3P20290 206 aaKnown RBP7.33□□□□□ -1.24
PTPRE-202ENST00000306042 PSG3Q16557 428 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 RFNGQ9Y644 331 aa7.33□□□□□ -1.24
PTPRE-202ENST00000306042 TRBV20OR9-2A0A075B6H5 130 aa7.32□□□□□ -1.24
PTPRE-202ENST00000306042 TRAV12-3A0A0B4J271 114 aa7.32□□□□□ -1.24
PTPRE-202ENST00000306042 IGKV1-39P01597 117 aa7.32□□□□□ -1.24
PTPRE-202ENST00000306042 MT-ND6P03923 174 aa7.32□□□□□ -1.24
PTPRE-202ENST00000306042 IGKV1D-39P04432 117 aa7.32□□□□□ -1.24
PTPRE-202ENST00000306042 FAM3BP58499 235 aaPredicted RBP7.32□□□□□ -1.24
PTPRE-202ENST00000306042 SPATA31B1PQ5VZV4 182 aa7.32□□□□□ -1.24
PTPRE-202ENST00000306042 IGFL4Q6B9Z1 124 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms