RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 IGHV1-8P0DP01 117 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 DAZ1Q9NQZ3 744 aaKnown RBP10.16□□□□□ -0.78
SLX4-201ENST00000294008 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 YPEL1O60688 119 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 SPATA31B1PQ5VZV4 182 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 YPEL2Q96QA6 119 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 GTF3C1Q12789 2109 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 CCL20P78556 96 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 IRF3Q14653 427 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
SLX4-201ENST00000294008 TRIP12Q14669 1992 aaPredicted RBP10.16□□□□□ -0.78
SLX4-201ENST00000294008 F5P12259 2224 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 IGKV4-1P06312 121 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 EFNB3Q15768 340 aa10.16□□□□□ -0.78
SLX4-201ENST00000294008 NOP10Q9NPE3 64 aaKnown RBP10.16□□□□□ -0.78
SLX4-201ENST00000294008 MSMBP08118 114 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 C9orf139Q6ZV77 190 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 NEGR1Q7Z3B1 354 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 CASP8AP2Q9UKL3 1982 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 RHODO00212 210 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 A0A0G2JNJ9 132 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 H2BFSP57053 126 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 OCC1Q8TAD7 63 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 Q9UFV3 132 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 WFDC6Q9BQY6 131 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 IGKV1D-43A0A0B4J1Z2 117 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 CTSGP08311 255 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 C8orf49Q96NF6 230 aa10.15□□□□□ -0.78
SLX4-201ENST00000294008 HLA-DRB4P13762 266 aa10.15□□□□□ -0.79
SLX4-201ENST00000294008 TIMP3P35625 211 aa10.15□□□□□ -0.79
SLX4-201ENST00000294008 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.79
SLX4-201ENST00000294008 SEM1Q6ZVN7 128 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 ACYP1P07311 99 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 NEUROG3Q9Y4Z2 214 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 CD160O95971 181 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 DOCK9Q9BZ29 2069 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 NMBP08949 121 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 RNF138Q8WVD3 245 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 FAM90A1Q86YD7 464 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 ANKRD31Q8N7Z5 1873 aa10.14□□□□□ -0.79
SLX4-201ENST00000294008 TSKUQ8WUA8 353 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 YLPM1P49750 1951 aaKnown RBP10.13□□□□□ -0.79
SLX4-201ENST00000294008 SHISA9B4DS77 424 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 PPP1R3EQ9H7J1 279 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 TRAV26-2A0A0B4J265 109 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 MINOS1Q5TGZ0 78 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 MINOS1-NBL1R4GNA1 71 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 ARMS2P0C7Q2 107 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 C1orf100Q5SVJ3 147 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 AMN1Q8IY45 258 aa10.13□□□□□ -0.79
SLX4-201ENST00000294008 RPP25LQ8N5L8 163 aaKnown RBP10.13□□□□□ -0.79
SLX4-201ENST00000294008 MYO16Q9Y6X6 1858 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 SRP19P09132 144 aaKnown RBP10.12□□□□□ -0.79
SLX4-201ENST00000294008 IGKV1D-13A0A0B4J2D9 117 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 A0A1B0GUS0 222 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 IGKV1-13P0DP09 117 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 C1QTNF5Q9BXJ0 243 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 A0A1W2PR77 199 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 TMEM178BH3BS89 294 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 AMBPP02760 352 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 C5orf64Q2M2E5 130 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 PINLYPA6NC86 204 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 F6UB75 175 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 MAJINQ3KP22 176 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 FER1L5A0AVI2 2057 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 MTCL1Q9Y4B5 1905 aaKnown RBP10.12□□□□□ -0.79
SLX4-201ENST00000294008 BUB1B-PAK6H3BSN5 160 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 I3L3M4 83 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 ITGB4P16144 1822 aa10.12□□□□□ -0.79
SLX4-201ENST00000294008 A8MWP6 167 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 IGLL5B9A064 214 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 IGHG2P01859 326 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 SMPXQ9UHP9 88 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 LIMS1P48059 325 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 LYPD2Q6UXB3 125 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 ZNF497Q6ZNH5 498 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 C4orf51C9J302 202 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 KLK5Q9Y337 293 aaPredicted RBP10.11□□□□□ -0.79
SLX4-201ENST00000294008 TRBV5-7A0A0A0MS05 114 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 PIFOQ8TCI5 191 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 Q5BKY6 102 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 AKAP11Q9UKA4 1901 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 ADAMTSL5Q6ZMM2 481 aa10.11□□□□□ -0.79
SLX4-201ENST00000294008 PROP1O75360 226 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 CADP27708 2225 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 A0A1B0GWJ7 208 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 FUSP35637 526 aaKnown RBP eCLIP10.1□□□□□ -0.79
SLX4-201ENST00000294008 PRR30Q53SZ7 412 aaPredicted RBP10.1□□□□□ -0.79
SLX4-201ENST00000294008 PQLC2LA1A4F0 135 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 TMEM14DPA8MWL7 114 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 SDK2Q58EX2 2172 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 BOD1L2Q8IYS8 172 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 NPBQ8NG41 125 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 SMCHD1A6NHR9 2005 aa10.1□□□□□ -0.79
SLX4-201ENST00000294008 GAGE12HA6NDE8 117 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms