RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 IL18BPO95998 194 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 HEPN1Q6WQI6 88 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 C9orf139Q6ZV77 190 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 REPIN1Q9BWE0 567 aaKnown RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 SYS1-DBNDD2H3BUS1 97 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 RPL15P61313 204 aaKnown RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 NAA38Q9BRA0 125 aaKnown RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 TRAV13-1A0A0B4J241 112 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 PPIFP30405 207 aaKnown RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 C1orf194Q5T5A4 169 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 C19orf48Q6RUI8 117 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 BDP1A6H8Y1 2624 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 OCC1Q8TAD7 63 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 NCOA6Q14686 2063 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 FOXL2P58012 376 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 IGLV3-21P80748 117 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 DLEU1O43261 78 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 SUPT4H1P63272 117 aaKnown RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 USMG5Q96IX5 58 aa7.23□□□□□ -1.25
NIPBL-201ENST00000282516 CHCHD2Q9Y6H1 151 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-201ENST00000282516 DENND4AQ7Z401 1863 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 NOTCH2Q04721 2471 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 RPL35AP18077 110 aaKnown RBP7.22□□□□□ -1.25
NIPBL-201ENST00000282516 MORN2Q502X0 79 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 A0A1B0GTI1 187 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 PSG3Q16557 428 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 MRPL27Q9P0M9 148 aaKnown RBP7.22□□□□□ -1.25
NIPBL-201ENST00000282516 LYZL1Q6UWQ5 148 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 LINC01590Q5TEZ4 76 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 PPP1R32Q7Z5V6 425 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 LINC00477Q96M19 166 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 LY96Q9Y6Y9 160 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 TIMM23O14925 209 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 TMEM141Q96I45 108 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 NDUFS5O43920 106 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 SLC25A45Q8N413 288 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 TRBV24-1A0A075B6N3 115 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 CLPSL1A2RUU4 121 aa7.22□□□□□ -1.25
NIPBL-201ENST00000282516 IGHG4P01861 327 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 TTC28Q96AY4 2481 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 DEPPQ9NTK1 212 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 FAM223BA6NKX1 122 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 SH2D1AO60880 128 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 FAM223AQ8IWN6 122 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 CELA3BP08861 270 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 C1QL2Q7Z5L3 287 aa7.21□□□□□ -1.25
NIPBL-201ENST00000282516 TRAV40A0A0B4J280 105 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 CHKB-CPT1BH3BT56 60 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 C14orf178Q8N769 122 aaPredicted RBP7.21□□□□□ -1.26
NIPBL-201ENST00000282516 NCOR1P1Q9H4R4 102 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 F8VVB4 439 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 F8VWA3 439 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 WISP3O95389 354 aaPredicted RBP7.21□□□□□ -1.26
NIPBL-201ENST00000282516 TRPT1Q86TN4 253 aaKnown RBP7.21□□□□□ -1.26
NIPBL-201ENST00000282516 RHODO00212 210 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 DMRTC2Q8IXT2 367 aaPredicted RBP7.21□□□□□ -1.26
NIPBL-201ENST00000282516 RNF222A6NCQ9 220 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 OOSP1A8MZH6 123 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 RLFQ13129 1914 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 TMEM158Q8WZ71 300 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 GFRA4Q9GZZ7 299 aa7.21□□□□□ -1.26
NIPBL-201ENST00000282516 hDV102S1A0JD36 115 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 RNF166Q96A37 237 aaPredicted RBP7.2□□□□□ -1.26
NIPBL-201ENST00000282516 EXOC3-AS1Q8N2X6 119 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 COL24A1Q17RW2 1714 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 TRAV25A0A0B4J276 109 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 RBM3P98179 157 aaKnown RBP7.2□□□□□ -1.26
NIPBL-201ENST00000282516 FAM201AQ5SY85 155 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 AGMATQ9BSE5 352 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 PMS2P5A8MQ11 134 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 NDUFC2O95298 119 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 ZNF883P0CG24 379 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 PSG7Q13046 419 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 ATP1A1-AS1Q5TC04 95 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 SPXQ9BT56 116 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 ANAPC1Q9H1A4 1944 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 PLXNB3Q9ULL4 1909 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 ATRAIDQ6UW56 229 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 LYPD1Q8N2G4 141 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 CTHRC1Q96CG8 243 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 LHBP01229 141 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 MPV17L2Q567V2 206 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 TRAV13-2A0A0B4J235 113 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 CCL3L1P16619 93 aa7.2□□□□□ -1.26
NIPBL-201ENST00000282516 MINOS1Q5TGZ0 78 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 TMEM131Q92545 1883 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 MINOS1-NBL1R4GNA1 71 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 FBLN5Q9UBX5 448 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 VWA8A3KMH1 1905 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 C5orf47Q569G3 176 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 HAMPP81172 84 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 FAM27E3Q08E93 113 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 TCF15Q12870 199 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 SPSB2Q99619 263 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 RNF5Q99942 180 aa7.19□□□□□ -1.26
NIPBL-201ENST00000282516 RPUSD1Q9UJJ7 312 aaKnown RBP7.19□□□□□ -1.26
NIPBL-201ENST00000282516 TRBV25-1A0A075B6N4 114 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms