RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 LEPP41159 167 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 SRSF4Q08170 494 aaKnown RBP9.16□□□□□ -0.94
USP6NL-201ENST00000277575 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 SERF1AO75920 110 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 ZNF688P0C7X2 276 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 CFHR2P36980 270 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 BEND2Q8NDZ0 799 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 PIEZO2Q9H5I5 2752 aa9.16□□□□□ -0.94
USP6NL-201ENST00000277575 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.94
USP6NL-201ENST00000277575 A0A1W2PPI3 338 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.94
USP6NL-201ENST00000277575 DUX4L9Q6RFH8 374 aaPredicted RBP9.15□□□□□ -0.94
USP6NL-201ENST00000277575 ZNF562Q6V9R5 426 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 C1QL4Q86Z23 238 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 ARL6IP6Q8N6S5 226 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 FOXC2Q99958 501 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 TRBV7-1A0A0A6YYK4 115 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 TCRAP04437 139 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 LOXP28300 417 aaPredicted RBP9.15□□□□□ -0.94
USP6NL-201ENST00000277575 UBE2E1P51965 193 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 NDPQ00604 133 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 TMEM170AQ8WVE7 144 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 USMG5Q96IX5 58 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 GAGE10A6NGK3 116 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 FABP2P12104 132 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 OR5AN1Q8NGI8 311 aa9.15□□□□□ -0.94
USP6NL-201ENST00000277575 HIVEP2P31629 2446 aa9.15□□□□□ -0.95
USP6NL-201ENST00000277575 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.15□□□□□ -0.95
USP6NL-201ENST00000277575 HOXA5P20719 270 aa9.15□□□□□ -0.95
USP6NL-201ENST00000277575 OR10J3Q5JRS4 329 aa9.15□□□□□ -0.95
USP6NL-201ENST00000277575 MAPK1IP1LQ8NDC0 245 aa9.15□□□□□ -0.95
USP6NL-201ENST00000277575 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.95
USP6NL-201ENST00000277575 NUDT11Q96G61 164 aa9.15□□□□□ -0.95
USP6NL-201ENST00000277575 NCOR1P1Q9H4R4 102 aa9.15□□□□□ -0.95
USP6NL-201ENST00000277575 NUP210Q8TEM1 1887 aaPredicted RBP9.15□□□□□ -0.95
USP6NL-201ENST00000277575 DENND4CQ5VZ89 1909 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 K7EM74 188 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 PPBPP02775 128 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 LINC01551Q86U37 167 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 C9orf139Q6ZV77 190 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 PRDM13Q9H4Q3 707 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 DMRT1Q9Y5R6 373 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 NAV2Q8IVL1 2488 aa9.14□□□□□ -0.95
USP6NL-201ENST00000277575 F2Z2F3 143 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 SAP30O75446 220 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 TDGF1P13385 188 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 GATA3P23771 443 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 JOSD1Q15040 202 aaPredicted RBP9.13□□□□□ -0.95
USP6NL-201ENST00000277575 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 ADMP35318 185 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 RUSC1-AS1Q66K80 236 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 ST20Q9HBF5 79 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 TRBV24-1A0A075B6N3 115 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 LYL1P12980 280 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 SLX1AQ9BQ83 275 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 SRSF8Q9BRL6 282 aaKnown RBP9.13□□□□□ -0.95
USP6NL-201ENST00000277575 LIME1Q9H400 295 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 ANAPC10Q9UM13 185 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 TLN1Q9Y490 2541 aaKnown RBP9.13□□□□□ -0.95
USP6NL-201ENST00000277575 DKK1O94907 266 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 GZMBP10144 247 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 Q5PR19 223 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 MRAP2Q96G30 205 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 C2orf88Q9BSF0 95 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 TMEM242Q9NWH2 141 aa9.13□□□□□ -0.95
USP6NL-201ENST00000277575 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 TRAV8-1A0A0A6YYK1 113 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 SRRM4A7MD48 611 aaKnown RBP9.12□□□□□ -0.95
USP6NL-201ENST00000277575 ZNF138P52744 262 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 TMEM190Q8WZ59 177 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 TNCP24821 2201 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 LOC102724200A0A096LPH7 203 aaPredicted RBP9.12□□□□□ -0.95
USP6NL-201ENST00000277575 A0A1B0GW64 132 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 FNDC10F2Z333 226 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 C17orf58Q2M2W7 97 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
USP6NL-201ENST00000277575 IGFL2Q6UWQ7 119 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 LCNL1Q6ZST4 164 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 RNF138Q8WVD3 245 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 GNB1LQ9BYB4 327 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 ZMAT5Q9UDW3 170 aaKnown RBP9.12□□□□□ -0.95
USP6NL-201ENST00000277575 MYO9AB2RTY4 2548 aa9.12□□□□□ -0.95
USP6NL-201ENST00000277575 FREM2Q5SZK8 3169 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms