RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 IGLC1P0CG04 106 aa17.59■□□□□ 0.41
CDR2-201ENST00000268383 GFRALQ6UXV0 394 aa17.59■□□□□ 0.41
CDR2-201ENST00000268383 Q86TA4 180 aa17.59■□□□□ 0.41
CDR2-201ENST00000268383 F11RQ9Y624 299 aaKnown RBP17.59■□□□□ 0.41
CDR2-201ENST00000268383 A0A1W2PRD5 423 aa17.58■□□□□ 0.41
CDR2-201ENST00000268383 A0A1W2PRF3 423 aa17.58■□□□□ 0.41
CDR2-201ENST00000268383 A0A1W2PRM7 423 aa17.58■□□□□ 0.41
CDR2-201ENST00000268383 ZNF785A8K8V0 405 aa17.58■□□□□ 0.41
CDR2-201ENST00000268383 LINC00614P0C842 121 aa17.58■□□□□ 0.41
CDR2-201ENST00000268383 IGLV2-11P01706 119 aa17.58■□□□□ 0.4
CDR2-201ENST00000268383 SFTPCP11686 197 aa17.58■□□□□ 0.4
CDR2-201ENST00000268383 PLGLAQ15195 96 aa17.58■□□□□ 0.4
CDR2-201ENST00000268383 RBPMS2Q6ZRY4 209 aaKnown RBP17.58■□□□□ 0.4
CDR2-201ENST00000268383 BCL6BQ8N143 479 aaPredicted RBP17.58■□□□□ 0.4
CDR2-201ENST00000268383 C8orf31Q8N9H6 132 aa17.58■□□□□ 0.4
CDR2-201ENST00000268383 OR4F17Q8NGA8 305 aa17.58■□□□□ 0.4
CDR2-201ENST00000268383 SRSF12Q8WXF0 261 aaKnown RBP17.58■□□□□ 0.4
CDR2-201ENST00000268383 ANKHD1Q8IWZ3 2542 aaKnown RBP17.58■□□□□ 0.4
CDR2-201ENST00000268383 KLF17Q5JT82 389 aaPredicted RBP17.57■□□□□ 0.4
CDR2-201ENST00000268383 CHEK1O14757 476 aa17.57■□□□□ 0.4
CDR2-201ENST00000268383 IGLV1-47P01700 117 aa17.57■□□□□ 0.4
CDR2-201ENST00000268383 TPPP3Q9BW30 176 aa17.57■□□□□ 0.4
CDR2-201ENST00000268383 CCL25O15444 150 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 LDLRAD2Q5SZI1 272 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 IGF2-ASQ6U949 168 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 BUB1B-PAK6H3BSN5 160 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 PVRIGQ6DKI7 326 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 ASCL5Q7RTU5 278 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 Q8NA96 180 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 ZC2HC1AQ96GY0 325 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 KAAG1Q9UBP8 84 aa17.56■□□□□ 0.4
CDR2-201ENST00000268383 LY6HO94772 140 aa17.55■□□□□ 0.4
CDR2-201ENST00000268383 LEPROTL1O95214 131 aa17.55■□□□□ 0.4
CDR2-201ENST00000268383 IGKV1-17P01599 117 aa17.55■□□□□ 0.4
CDR2-201ENST00000268383 RASL11BQ9BPW5 248 aa17.55■□□□□ 0.4
CDR2-201ENST00000268383 LOC102724200A0A096LPH7 203 aaPredicted RBP17.55■□□□□ 0.4
CDR2-201ENST00000268383 ARMS2P0C7Q2 107 aa17.55■□□□□ 0.4
CDR2-201ENST00000268383 SYS1-DBNDD2H3BUS1 97 aa17.54■□□□□ 0.4
CDR2-201ENST00000268383 I3L2K1 104 aa17.54■□□□□ 0.4
CDR2-201ENST00000268383 ZNF492Q9P255 531 aa17.54■□□□□ 0.4
CDR2-201ENST00000268383 RALYQ9UKM9 306 aaKnown RBP17.54■□□□□ 0.4
CDR2-201ENST00000268383 M0R3E3 92 aa17.54■□□□□ 0.4
CDR2-201ENST00000268383 FBLN7Q53RD9 439 aa17.54■□□□□ 0.4
CDR2-201ENST00000268383 RPEQ96AT9 228 aa17.54■□□□□ 0.4
CDR2-201ENST00000268383 TMUB1Q9BVT8 246 aa17.54■□□□□ 0.4
CDR2-201ENST00000268383 MRPS16Q9Y3D3 137 aaKnown RBP17.54■□□□□ 0.4
CDR2-201ENST00000268383 CNIH1O95406 144 aa17.53■□□□□ 0.4
CDR2-201ENST00000268383 OTORQ9NRC9 128 aa17.53■□□□□ 0.4
CDR2-201ENST00000268383 OVOL3O00110 214 aa17.53■□□□□ 0.4
CDR2-201ENST00000268383 RELQ04864 619 aaPredicted RBP17.53■□□□□ 0.4
CDR2-201ENST00000268383 APOHP02749 345 aaPredicted RBP17.52■□□□□ 0.4
CDR2-201ENST00000268383 PTTG1IPP53801 180 aa17.52■□□□□ 0.4
CDR2-201ENST00000268383 PLP1P60201 277 aa17.52■□□□□ 0.4
CDR2-201ENST00000268383 ZFHX3Q15911 3703 aa17.52■□□□□ 0.4
CDR2-201ENST00000268383 MUC6Q6W4X9 2439 aa17.52■□□□□ 0.39
CDR2-201ENST00000268383 C20orf202A1L168 122 aa17.52■□□□□ 0.39
CDR2-201ENST00000268383 LINC01560Q8TB33 94 aa17.52■□□□□ 0.39
CDR2-201ENST00000268383 SMIM12Q96EX1 92 aa17.52■□□□□ 0.39
CDR2-201ENST00000268383 HILPDAQ9Y5L2 63 aa17.52■□□□□ 0.39
CDR2-201ENST00000268383 MUC21A0A0G2JKD1 596 aa17.51■□□□□ 0.39
CDR2-201ENST00000268383 MUC21A0A140T8X8 626 aa17.51■□□□□ 0.39
CDR2-201ENST00000268383 MPV17L2Q567V2 206 aa17.51■□□□□ 0.39
CDR2-201ENST00000268383 CT83Q5H943 113 aa17.51■□□□□ 0.39
CDR2-201ENST00000268383 MUC21Q5SSG8 566 aa17.51■□□□□ 0.39
CDR2-201ENST00000268383 JKAMPQ9P055 326 aa17.51■□□□□ 0.39
CDR2-201ENST00000268383 HRNRQ86YZ3 2850 aaPredicted RBP17.51■□□□□ 0.39
CDR2-201ENST00000268383 PPIAL4CA0A0B4J2A2 164 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 NPIPB6E9PJ23 425 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 PPIAL4GP0DN37 164 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 HTR1DP28221 377 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 MUC15Q8N387 334 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 ONECUT1Q9UBC0 465 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 TMSB15BA0A087X1C1 80 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.5■□□□□ 0.39
CDR2-201ENST00000268383 VSTM5A8MXK1 200 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 TIMM23O14925 209 aa17.5■□□□□ 0.39
CDR2-201ENST00000268383 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.49■□□□□ 0.39
CDR2-201ENST00000268383 K7EIM0 57 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 PCP4P48539 62 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 CRIP1P50238 77 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 FOXE3Q13461 319 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 C8orf49Q96NF6 230 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 NGBQ9NPG2 151 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 PPP1R14DQ9NXH3 145 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 PTPRQQ9UMZ3 2332 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 CBY1Q9Y3M2 126 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 COX11Q9Y6N1 276 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 ATRXP46100 2492 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 IL4P05112 153 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 FAM106CPP0CH98 169 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 GRNP28799 593 aaKnown RBP17.49■□□□□ 0.39
CDR2-201ENST00000268383 FAM106AQ4KMX7 169 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 GFRA4Q9GZZ7 299 aa17.49■□□□□ 0.39
CDR2-201ENST00000268383 TRBV19A0A075B6N1 114 aa17.48■□□□□ 0.39
CDR2-201ENST00000268383 FCGR2BP31994 310 aaPredicted RBP17.48■□□□□ 0.39
CDR2-201ENST00000268383 CHCHD1Q96BP2 118 aaKnown RBP17.48■□□□□ 0.39
CDR2-201ENST00000268383 RNASE8Q8TDE3 154 aaKnown RBP17.48■□□□□ 0.39
CDR2-201ENST00000268383 CRXO43186 299 aaPredicted RBP17.47■□□□□ 0.39
CDR2-201ENST00000268383 SNAI2O43623 268 aa17.47■□□□□ 0.39
CDR2-201ENST00000268383 FXYD7P58549 80 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms