RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 A0A1W2PRF3 423 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 A0A1W2PRM7 423 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 CSN3P07498 182 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 CA7P43166 264 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 MRPL27Q9P0M9 148 aaKnown RBP8.04□□□□□ -1.12
LIG3-201ENST00000262327 S4R3C0 116 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 CACNA1AO00555 2505 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 IGLL1P15814 213 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 TNFRSF1AP19438 455 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 EXOC3-AS1Q8N2X6 119 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 CIARTQ8N365 385 aaPredicted RBP8.04□□□□□ -1.12
LIG3-201ENST00000262327 STXBP6Q8NFX7 210 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 OR1N2Q8NGR9 330 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 GTSF1Q8WW33 167 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 URB1-AS1Q96HZ7 61 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 LINC00574Q9H8X3 128 aa8.04□□□□□ -1.12
LIG3-201ENST00000262327 NDUFB3O43676 98 aa8.03□□□□□ -1.12
LIG3-201ENST00000262327 LYZP61626 148 aa8.03□□□□□ -1.12
LIG3-201ENST00000262327 PAX2Q02962 417 aa8.03□□□□□ -1.12
LIG3-201ENST00000262327 WASHC3Q9Y3C0 194 aa8.03□□□□□ -1.12
LIG3-201ENST00000262327 IGHV2-26A0A0B4J1V2 119 aa8.03□□□□□ -1.12
LIG3-201ENST00000262327 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
LIG3-201ENST00000262327 HIST1H1EP10412 219 aaKnown RBP8.03□□□□□ -1.12
LIG3-201ENST00000262327 SUB1P53999 127 aaKnown RBP eCLIP8.03□□□□□ -1.12
LIG3-201ENST00000262327 hDV102S1A0JD36 115 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 TMEM178BH3BS89 294 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 MRGPRG-AS1Q2M3A8 158 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 COX19Q49B96 90 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 KLHDC1Q8N7A1 406 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 C7orf69Q9H7B7 122 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 A0A1B0GV72 72 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 G3V4G9 280 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 PPIAL4GP0DN37 164 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 COX7A1P24310 79 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 LY6DQ14210 128 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 LRRC10Q5BKY1 277 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 PRNTQ86SH4 94 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 ZC2HC1AQ96GY0 325 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 TPPP3Q9BW30 176 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 Q9H3A6 140 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 SMPXQ9UHP9 88 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 IGF2RP11717 2491 aa8.02□□□□□ -1.13
LIG3-201ENST00000262327 C2orf70A6NJV1 201 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 P01737 135 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 LOXP28300 417 aaPredicted RBP8.01□□□□□ -1.13
LIG3-201ENST00000262327 MC5RP33032 325 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 VMA21Q3ZAQ7 101 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 VSTM2AQ8TAG5 236 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 PERPQ96FX8 193 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 C17orf77Q96MU5 243 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 GPR82Q96P67 336 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 C16orf97H3BN30 126 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 THBDP07204 575 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 MYCNOSP40205 109 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 GOLT1AQ6ZVE7 132 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 FAM231DQ6ZW35 169 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 ZNF48Q96MX3 618 aaPredicted RBP8.01□□□□□ -1.13
LIG3-201ENST00000262327 FBXL15Q9H469 300 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 RPP21Q9H633 154 aaKnown RBP8.01□□□□□ -1.13
LIG3-201ENST00000262327 AKAP6Q13023 2319 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 RBP4P02753 201 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 RPL27AP46776 148 aaKnown RBP8.01□□□□□ -1.13
LIG3-201ENST00000262327 TCTAP57738 103 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 THAP8Q8NA92 274 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 FER1L6-AS1Q8NA97 138 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 OR4F17Q8NGA8 305 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 DAZAP1Q96EP5 407 aaKnown RBP8.01□□□□□ -1.13
LIG3-201ENST00000262327 DYNLRB1Q9NP97 96 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 SELENOKQ9Y6D0 94 aa8.01□□□□□ -1.13
LIG3-201ENST00000262327 HBBP68871 147 aa8□□□□□ -1.13
LIG3-201ENST00000262327 MEF2CQ06413 473 aaPredicted RBP8□□□□□ -1.13
LIG3-201ENST00000262327 FAM71F2Q6NXP2 309 aa8□□□□□ -1.13
LIG3-201ENST00000262327 OR8B3Q8NGG8 313 aa8□□□□□ -1.13
LIG3-201ENST00000262327 TRAV9-2A0A087WT02 112 aa8□□□□□ -1.13
LIG3-201ENST00000262327 TRAV26-1A0A087WT03 109 aa8□□□□□ -1.13
LIG3-201ENST00000262327 MUC21A0A0G2JKD1 596 aa8□□□□□ -1.13
LIG3-201ENST00000262327 MUC21A0A140T8X8 626 aa8□□□□□ -1.13
LIG3-201ENST00000262327 OR4C46A6NHA9 309 aa8□□□□□ -1.13
LIG3-201ENST00000262327 TCRAP04437 139 aa8□□□□□ -1.13
LIG3-201ENST00000262327 IGHV1-8P0DP01 117 aa8□□□□□ -1.13
LIG3-201ENST00000262327 COL8A1P27658 744 aa8□□□□□ -1.13
LIG3-201ENST00000262327 CRYBA4P53673 196 aa8□□□□□ -1.13
LIG3-201ENST00000262327 ATP5IP56385 69 aaPredicted RBP8□□□□□ -1.13
LIG3-201ENST00000262327 MUC21Q5SSG8 566 aa8□□□□□ -1.13
LIG3-201ENST00000262327 MUC15Q8N387 334 aa8□□□□□ -1.13
LIG3-201ENST00000262327 WIPF2Q8TF74 440 aaPredicted RBP8□□□□□ -1.13
LIG3-201ENST00000262327 A0A1B0GXF2 115 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 CEACAM3P40198 252 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 PSG9Q00887 426 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 MPV17L2Q567V2 206 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 NCOR2Q9Y618 2525 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 SPTBN1Q01082 2364 aaKnown RBP7.99□□□□□ -1.13
LIG3-201ENST00000262327 IGHV1-24A0A0C4DH33 117 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 CCL21O00585 134 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 CHEK1O14757 476 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 SNAI2O43623 268 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 GP9P14770 177 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 PLGLAQ15195 96 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 FBXL19-AS1Q494R0 122 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms