RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 NDUFB8O95169 186 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 ATP5L2Q7Z4Y8 100 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 AP1S3Q96PC3 154 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 SLC25A39Q9BZJ4 359 aaPredicted RBP12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 NCBP2LA6PVI3 153 aaKnown RBP12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 CCL25O15444 150 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 IGLV2-23P01705 113 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 NHLH1Q02575 133 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 Q6ZS92 163 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 SIGLEC9Q9Y336 463 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 GNG7O60262 68 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 Q71RC1 249 aaPredicted RBP12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 ASCL5Q7RTU5 278 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 FAM90A27PA6NNH2 459 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 TOMM40O96008 361 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 ARMS2P0C7Q2 107 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 TMEM11P17152 192 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 ARF6P62330 175 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 RIGQ13278 110 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 TRGV9Q99603 122 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 AP5S1Q9NUS5 200 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 ATMQ13315 3056 aa12.93□□□□□ -0.34
SNCAIP-202ENST00000261368 ATRXP46100 2492 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 IGHV2-26A0A0B4J1V2 119 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 A0A1B0GUT8 65 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 LY6HO94772 140 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 SPATA12Q7Z6I5 190 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 WFDC3Q8IUB2 231 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 ABHD17AQ96GS6 310 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 PPIAL4CA0A0B4J2A2 164 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 LIPFP07098 398 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 PRSS33Q8NF86 280 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 SCNM1Q9BWG6 230 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 RALYQ9UKM9 306 aaKnown RBP12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 COX11Q9Y6N1 276 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 KALRNO60229 2985 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 A0A087X0K7 114 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 HSPB8Q9UJY1 196 aa12.92□□□□□ -0.34
SNCAIP-202ENST00000261368 C2orf70A6NJV1 201 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 FBLN7Q53RD9 439 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 Q86TA4 180 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 NUP37Q8NFH4 326 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 LINC01560Q8TB33 94 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 VPS25Q9BRG1 176 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 SMG1Q96Q15 3661 aaKnown RBP12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 IGHV1-3A0A0C4DH29 117 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 CSN1S1P47710 185 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 TEX45Q8NA69 505 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 AAMDCQ9H7C9 122 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 MRPS16Q9Y3D3 137 aaKnown RBP12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
SNCAIP-202ENST00000261368 FCN3O75636 299 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 CEACAM8P31997 349 aaPredicted RBP12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 HLA-DRB1P01911 266 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 F11RQ9Y624 299 aaKnown RBP12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 CUL9Q8IWT3 2517 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 OR2J3O76001 311 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 MUC15Q8N387 334 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 LINC00574Q9H8X3 128 aa12.9□□□□□ -0.34
SNCAIP-202ENST00000261368 CD3EP07766 207 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 GP9P14770 177 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 KLF5Q13887 457 aaPredicted RBP12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 SFTPCP11686 197 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 UBE2V1Q13404 147 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 PIP4P1Q86T03 277 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 PSG8Q9UQ74 426 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 TIMM23O14925 209 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 IGFL4Q6B9Z1 124 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 ORAOV1Q8WV07 137 aa12.89□□□□□ -0.35
SNCAIP-202ENST00000261368 E7EQL1 145 aa12.88□□□□□ -0.35
SNCAIP-202ENST00000261368 RNASE8Q8TDE3 154 aaKnown RBP12.88□□□□□ -0.35
SNCAIP-202ENST00000261368 LTAP01374 205 aa12.88□□□□□ -0.35
SNCAIP-202ENST00000261368 THBDP07204 575 aa12.88□□□□□ -0.35
SNCAIP-202ENST00000261368 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
SNCAIP-202ENST00000261368 ZC2HC1AQ96GY0 325 aa12.88□□□□□ -0.35
SNCAIP-202ENST00000261368 NAA38Q9BRA0 125 aaKnown RBP12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 A0A1B0GXF2 115 aa12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 OR2T8A6NH00 312 aa12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 IGLC1P0CG04 106 aa12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 TMEM189A5PLL7 270 aa12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 URB1-AS1Q96HZ7 61 aa12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 ST20Q9HBF5 79 aa12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 SOX21Q9Y651 276 aaPredicted RBP12.87□□□□□ -0.35
SNCAIP-202ENST00000261368 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 BUB1B-PAK6H3BSN5 160 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 RNF125Q96EQ8 232 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 AKAP13Q12802 2813 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 IGHV3OR16-13A0A075B7E8 117 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 IGHV3-74A0A0B4J1X5 117 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms