RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
LIMD2-201ENST00000259006 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
LIMD2-201ENST00000259006 C11orf52Q96A22 123 aa11.28□□□□□ -0.6
LIMD2-201ENST00000259006 CALYQ9NYX4 217 aa11.28□□□□□ -0.6
LIMD2-201ENST00000259006 AMMECR1Q9Y4X0 333 aaPredicted RBP11.28□□□□□ -0.6
LIMD2-201ENST00000259006 AKAP13Q12802 2813 aa11.27□□□□□ -0.6
LIMD2-201ENST00000259006 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.6
LIMD2-201ENST00000259006 MS4A6AQ9H2W1 248 aa11.27□□□□□ -0.6
LIMD2-201ENST00000259006 OSTCQ9NRP0 149 aa11.27□□□□□ -0.6
LIMD2-201ENST00000259006 ORM2P19652 201 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 PRTN3P24158 256 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 LOXL3P58215 753 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 A0A1B0GWB2 263 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 A1L4Q6 167 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 PRR33A8MZF0 331 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 KLK10O43240 276 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 KIR2DL2P43627 348 aaPredicted RBP11.26□□□□□ -0.61
LIMD2-201ENST00000259006 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
LIMD2-201ENST00000259006 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 NBASA2RRP1 2371 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 PTPRBP23467 1997 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 TRBV20-1A0A075B6N2 111 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 MSMPQ1L6U9 139 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 MBD6Q96DN6 1003 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 PGLYRP4Q96LB8 373 aa11.26□□□□□ -0.61
LIMD2-201ENST00000259006 E7EUB6 86 aa11.25□□□□□ -0.61
LIMD2-201ENST00000259006 CCDC179H3BU77 68 aa11.25□□□□□ -0.61
LIMD2-201ENST00000259006 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
LIMD2-201ENST00000259006 GCSAMQ8N6F7 178 aa11.25□□□□□ -0.61
LIMD2-201ENST00000259006 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
LIMD2-201ENST00000259006 Q6ZUT4 128 aa11.25□□□□□ -0.61
LIMD2-201ENST00000259006 RAB1BQ9H0U4 201 aa11.25□□□□□ -0.61
LIMD2-201ENST00000259006 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 COX7A2P2O60397 106 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 TAS2R45P59539 299 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 WDR31Q8NA23 367 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 NPIPB3Q92617 1050 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 CCL13Q99616 98 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 CRXO43186 299 aaPredicted RBP11.24□□□□□ -0.61
LIMD2-201ENST00000259006 APOMO95445 188 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 MOSP00540 346 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 C3orf56Q8N813 242 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 H1FXQ92522 213 aaKnown RBP11.24□□□□□ -0.61
LIMD2-201ENST00000259006 GRAMD2BQ96HH9 432 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 SPXQ9BT56 116 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 TM2D2Q9BX73 214 aa11.24□□□□□ -0.61
LIMD2-201ENST00000259006 MGST3O14880 152 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 SLC25A5P05141 298 aaKnown RBP11.23□□□□□ -0.61
LIMD2-201ENST00000259006 ZNF883P0CG24 379 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 NMUP48645 174 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 CR1LQ2VPA4 569 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 Q71RC1 249 aaPredicted RBP11.23□□□□□ -0.61
LIMD2-201ENST00000259006 FAM90A1Q86YD7 464 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 FAM216BQ8N7L0 139 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 PAXXQ9BUH6 204 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 WNK2Q9Y3S1 2297 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 TEX50A0A1B0GTY4 177 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 TCF15Q12870 199 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 ZCCHC24Q8N2G6 241 aaKnown RBP11.23□□□□□ -0.61
LIMD2-201ENST00000259006 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 TMEM14BQ9NUH8 114 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 VPREB3Q9UKI3 123 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 MED13LQ71F56 2210 aa11.23□□□□□ -0.61
LIMD2-201ENST00000259006 F8W1H4 67 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 CCL11P51671 97 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 FXYD2P54710 66 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 SLC25A2Q9BXI2 301 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 NHP2Q9NX24 153 aaKnown RBP11.22□□□□□ -0.61
LIMD2-201ENST00000259006 LINC00312Q9Y6C7 94 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 IGF2RP11717 2491 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 M0R1B8 84 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 SAA1P0DJI8 122 aaPredicted RBP11.22□□□□□ -0.61
LIMD2-201ENST00000259006 RBMXL3Q8N7X1 1067 aaKnown RBP11.22□□□□□ -0.61
LIMD2-201ENST00000259006 ADTRPQ96IZ2 230 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 PGPA6NDG6 321 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 NCR2O95944 276 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 HCP5Q6MZN7 132 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 LINC00322Q6ZN03 302 aaPredicted RBP11.22□□□□□ -0.61
LIMD2-201ENST00000259006 PRSS33Q8NF86 280 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 PPP1R35Q8TAP8 253 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 C1RLQ9NZP8 487 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 LY96Q9Y6Y9 160 aa11.22□□□□□ -0.61
LIMD2-201ENST00000259006 FGF6P10767 208 aa11.21□□□□□ -0.61
LIMD2-201ENST00000259006 FXYD7P58549 80 aa11.21□□□□□ -0.61
LIMD2-201ENST00000259006 C17orf58Q2M2W7 97 aa11.21□□□□□ -0.61
LIMD2-201ENST00000259006 C9orf106Q8NAJ2 232 aa11.21□□□□□ -0.61
LIMD2-201ENST00000259006 PRR7Q8TB68 274 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms