RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 VKORC1Q9BQB6 163 aa9.59□□□□□ -0.87
CCNA1-201ENST00000255465 RNASE7Q9H1E1 156 aaKnown RBP9.59□□□□□ -0.87
CCNA1-201ENST00000255465 IL36RNQ9UBH0 155 aa9.59□□□□□ -0.87
CCNA1-201ENST00000255465 TRBV6-6A0A0A6YYG2 114 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 IGKV1D-13A0A0B4J2D9 117 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 LINC01619G3V211 115 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 SNCGO76070 127 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 IGLV2-8P01709 118 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 IGKV1-13P0DP09 117 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 FOXE3Q13461 319 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 ZDHHC23Q8IYP9 409 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 IGF2BP2-AS1Q96M15 143 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 DUX5Q96PT3 197 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 PRDM14Q9GZV8 571 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 SELENOKQ9Y6D0 94 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 INTS1Q8N201 2190 aaKnown RBP9.58□□□□□ -0.88
CCNA1-201ENST00000255465 ICE1Q9Y2F5 2266 aa9.58□□□□□ -0.88
CCNA1-201ENST00000255465 A8MWL6 223 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 DNPH1O43598 174 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 IGKV1-39P01597 117 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 IGKV1D-39P04432 117 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 CT83Q5H943 113 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 RPRMLQ8N4K4 120 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
CCNA1-201ENST00000255465 ZNF524Q96C55 264 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 ATP23Q9Y6H3 246 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 GGTLC3B5MD39 225 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 ZG16O60844 167 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 CRYGBP07316 175 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 FXYD2P54710 66 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 RBM11P57052 281 aaKnown RBP9.57□□□□□ -0.88
CCNA1-201ENST00000255465 ADORA2A-AS1P86434 159 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 SRYQ05066 204 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 FXYD3Q14802 87 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 C18orf15Q96N68 181 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 ZNF442Q9H7R0 627 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 UBTD1Q9HAC8 227 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 FAM215AQ9Y5M1 114 aa9.57□□□□□ -0.88
CCNA1-201ENST00000255465 SH2D7A6NKC9 451 aaPredicted RBP9.56□□□□□ -0.88
CCNA1-201ENST00000255465 H3BML4 177 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.56□□□□□ -0.88
CCNA1-201ENST00000255465 NDUFS7O75251 213 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 FHL3Q13643 280 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 H1FNTQ75WM6 255 aaPredicted RBP9.56□□□□□ -0.88
CCNA1-201ENST00000255465 PIGCQ92535 297 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 COQ2Q96H96 371 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 LYZL4Q96KX0 146 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 CHAC1Q9BUX1 264 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 ONECUT1Q9UBC0 465 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 COL12A1Q99715 3063 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 LRRK2Q5S007 2527 aa9.56□□□□□ -0.88
CCNA1-201ENST00000255465 TMED7-TICAM2A0A0A6YYA0 188 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 MYOD1P15172 320 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 SLC25A53Q5H9E4 307 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 RBPMS2Q6ZRY4 209 aaKnown RBP9.55□□□□□ -0.88
CCNA1-201ENST00000255465 ZNF808Q8N4W9 903 aaPredicted RBP9.55□□□□□ -0.88
CCNA1-201ENST00000255465 GFRA4Q9GZZ7 299 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 HCFC1P51610 2035 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 MS4A18H0YCH9 400 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 EFNA2O43921 213 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 CSN3P07498 182 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 C12orf74Q32Q52 190 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 MS4A18Q3C1V0 323 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 Q6ZPA2 131 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 FOXL2NBQ6ZUU3 175 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 SEM1Q6ZVN7 128 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 STPG3Q8N7X2 389 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 FAM169BQ8N8A8 192 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 ITLN2Q8WWU7 325 aaPredicted RBP9.55□□□□□ -0.88
CCNA1-201ENST00000255465 RASL10AQ92737 203 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 RASL11BQ9BPW5 248 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 AP5S1Q9NUS5 200 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 DOPEY1Q5JWR5 2465 aa9.55□□□□□ -0.88
CCNA1-201ENST00000255465 RRHO14718 337 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 MGST3O14880 152 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 RBP4P02753 201 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 P0C879 139 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 CLRN1P58418 232 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 FAM159AQ6UWV7 190 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 RND1Q92730 232 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
CCNA1-201ENST00000255465 KLF12Q9Y4X4 402 aa9.54□□□□□ -0.88
CCNA1-201ENST00000255465 NPIPB6E9PJ23 425 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
CCNA1-201ENST00000255465 TBC1D28Q2M2D7 210 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 GGNQ86UU5 652 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 WDR31Q8NA23 367 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 ZNRF2Q8NHG8 242 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 SLC25A2Q9BXI2 301 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 FBXL15Q9H469 300 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 SPTAN1Q13813 2472 aaKnown RBP9.53□□□□□ -0.88
CCNA1-201ENST00000255465 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
CCNA1-201ENST00000255465 IGKV1D-43A0A0B4J1Z2 117 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms