RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IGKCP01834 107 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 KLHL30-AS1Q8NEE0 82 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 IGLV1-44P01699 117 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 Q6ZRM9 215 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 SHANK2-AS3Q9BTD1 123 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 IGKV1-6A0A0C4DH72 117 aa15.38■□□□□ 0.05
PTPRE-201ENST00000254667 GSN-AS1Q9NRJ2 163 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 PLXNA4Q9HCM2 1894 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 LYZL1Q6UWQ5 148 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 DPH3P1Q9H4G8 78 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 SH2D1AO60880 128 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 NDPQ00604 133 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 RPRMLQ8N4K4 120 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 WFDC12Q8WWY7 111 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 C5orf30Q96GV9 206 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 A0A1W2PPI3 338 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 RPL36AP83881 106 aaKnown RBP15.37■□□□□ 0.05
PTPRE-201ENST00000254667 RPL36ALQ969Q0 106 aaKnown RBP15.37■□□□□ 0.05
PTPRE-201ENST00000254667 HS3ST6Q96QI5 342 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 TANC1Q9C0D5 1861 aa15.37■□□□□ 0.05
PTPRE-201ENST00000254667 Q6ZR03 302 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 LCNL1Q6ZST4 164 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 NDUFB8O95169 186 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 INSP01308 110 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 TEX36Q5VZQ5 186 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 UBE2CO00762 179 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 PLNP26678 52 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 LAMTOR2Q9Y2Q5 125 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 SPTBN1Q01082 2364 aaKnown RBP15.36■□□□□ 0.05
PTPRE-201ENST00000254667 IGHV1-69DA0A0B4J2H0 117 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 IGHV1-69P01742 117 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 GZMBP10144 247 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 LINC00205P59089 165 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 ZNF833PQ6ZTB9 187 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 LINC00311Q8N616 119 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 CFHR2P36980 270 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 TMEM14BQ9NUH8 114 aa15.36■□□□□ 0.05
PTPRE-201ENST00000254667 FCN3O75636 299 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 TTC32Q5I0X7 151 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 ZNF329Q86UD4 541 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 OR9G4Q8NGQ1 327 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 GFI1BQ5VTD9 330 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 DERL1Q9BUN8 251 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 IGHV2-70DA0A0C4DH43 119 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 NLRC5Q86WI3 1866 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 COLCA2A8K830 154 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 YPEL3P61236 119 aaPredicted RBP15.35■□□□□ 0.05
PTPRE-201ENST00000254667 ACTL10Q5JWF8 245 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 SPCS1Q9Y6A9 102 aa15.35■□□□□ 0.05
PTPRE-201ENST00000254667 D6R8Y8 96 aa15.34■□□□□ 0.05
PTPRE-201ENST00000254667 C1orf147Q96MC9 270 aaPredicted RBP15.34■□□□□ 0.05
PTPRE-201ENST00000254667 IGLV3-9A0A075B6K5 115 aa15.34■□□□□ 0.05
PTPRE-201ENST00000254667 A0A1B0GWB2 263 aa15.34■□□□□ 0.05
PTPRE-201ENST00000254667 RNF223E7ERA6 249 aa15.34■□□□□ 0.05
PTPRE-201ENST00000254667 CXCL1P09341 107 aa15.34■□□□□ 0.05
PTPRE-201ENST00000254667 MS4A6AQ9H2W1 248 aa15.34■□□□□ 0.05
PTPRE-201ENST00000254667 Q5PR19 223 aa15.34■□□□□ 0.05
PTPRE-201ENST00000254667 TRAV12-3A0A0B4J271 114 aa15.33■□□□□ 0.05
PTPRE-201ENST00000254667 SLC25A20O43772 301 aa15.33■□□□□ 0.05
PTPRE-201ENST00000254667 VGLL1Q99990 258 aa15.33■□□□□ 0.05
PTPRE-201ENST00000254667 IGKV3D-20A0A0C4DH25 116 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 VCYO14598 125 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 MORN3Q6PF18 240 aaPredicted RBP15.33■□□□□ 0.04
PTPRE-201ENST00000254667 NDUFA4L2Q9NRX3 87 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 A0A1B0GV90 55 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 HIST1H2BLQ99880 126 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 NDUFAF3Q9BU61 184 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 PTPRDP23468 1912 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 MYO7BQ6PIF6 2116 aa15.33■□□□□ 0.04
PTPRE-201ENST00000254667 J3QLI3 93 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 A0A087WX48 190 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 OVOL3O00110 214 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 ZNF876PQ49A33 203 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 LINC00469Q8N7U9 141 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 TRGV1A0A0A0MS02 117 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 LOXP28300 417 aaPredicted RBP15.32■□□□□ 0.04
PTPRE-201ENST00000254667 ZNF815PA8K554 130 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 SEC11AP67812 179 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 NUP35Q8NFH5 326 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 Q8TAT8 98 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 FAM215AQ9Y5M1 114 aa15.32■□□□□ 0.04
PTPRE-201ENST00000254667 E9PQ18 207 aa15.31■□□□□ 0.04
PTPRE-201ENST00000254667 TMEM86BQ8N661 226 aa15.31■□□□□ 0.04
PTPRE-201ENST00000254667 LOC105371267A0A1B0GV96 52 aa15.31■□□□□ 0.04
PTPRE-201ENST00000254667 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.31■□□□□ 0.04
PTPRE-201ENST00000254667 Q86TA4 180 aa15.31■□□□□ 0.04
PTPRE-201ENST00000254667 ATP6V0E1O15342 81 aa15.31■□□□□ 0.04
PTPRE-201ENST00000254667 GFRA4Q9GZZ7 299 aa15.31■□□□□ 0.04
PTPRE-201ENST00000254667 COL6A6A6NMZ7 2263 aa15.31■□□□□ 0.04
PTPRE-201ENST00000254667 LINC00587B1AMM8 73 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 C17orf58Q2M2W7 97 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 WDR86Q86TI4 376 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 REG4Q9BYZ8 158 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 HEATR1Q9H583 2144 aaKnown RBP15.3■□□□□ 0.04
PTPRE-201ENST00000254667 HIST3H2BBQ8N257 126 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 RUSC1-AS1Q66K80 236 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 MTURNQ8N3F0 131 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 NCR2O95944 276 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 AMBPP02760 352 aa15.3■□□□□ 0.04
PTPRE-201ENST00000254667 MLANAQ16655 118 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms