RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 RAB1BQ9H0U4 201 aa16.4■□□□□ 0.22
RARA-201ENST00000254066 TIMM8BQ9Y5J9 83 aaPredicted RBP16.4■□□□□ 0.22
RARA-201ENST00000254066 CNOT1A5YKK6 2376 aaKnown RBP16.4■□□□□ 0.22
RARA-201ENST00000254066 IGKV1D-37A0A075B6S9 117 aa16.4■□□□□ 0.22
RARA-201ENST00000254066 A0A096LNJ9 63 aa16.4■□□□□ 0.22
RARA-201ENST00000254066 AGFG2O95081 481 aa16.39■□□□□ 0.21
RARA-201ENST00000254066 SUB1P53999 127 aaKnown RBP eCLIP16.39■□□□□ 0.21
RARA-201ENST00000254066 ABHD17BQ5VST6 288 aa16.39■□□□□ 0.21
RARA-201ENST00000254066 DHRS13Q6UX07 377 aa16.39■□□□□ 0.21
RARA-201ENST00000254066 OR8A1Q8NGG7 326 aa16.39■□□□□ 0.21
RARA-201ENST00000254066 KBTBD11-OT1A0A1B0GTJ5 212 aa16.39■□□□□ 0.21
RARA-201ENST00000254066 ZCCHC24Q8N2G6 241 aaKnown RBP16.39■□□□□ 0.21
RARA-201ENST00000254066 SGK494Q96LW2 274 aa16.39■□□□□ 0.21
RARA-201ENST00000254066 TSSC4Q9Y5U2 329 aaPredicted RBP16.39■□□□□ 0.21
RARA-201ENST00000254066 KIR2DL2P43627 348 aaPredicted RBP16.38■□□□□ 0.21
RARA-201ENST00000254066 FOXC1Q12948 553 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 ZNF493Q6ZR52 646 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 Q86TA4 180 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 OSR1Q8TAX0 266 aaPredicted RBP16.38■□□□□ 0.21
RARA-201ENST00000254066 NPIPB3Q92617 1050 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 SHISA9B4DS77 424 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 ACP1P24666 158 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 HARBI1Q96MB7 349 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 SPANXB1Q9NS25 103 aaPredicted RBP16.38■□□□□ 0.21
RARA-201ENST00000254066 PSG8Q9UQ74 426 aa16.38■□□□□ 0.21
RARA-201ENST00000254066 SAA1P0DJI8 122 aaPredicted RBP16.37■□□□□ 0.21
RARA-201ENST00000254066 ZNF562Q6V9R5 426 aa16.37■□□□□ 0.21
RARA-201ENST00000254066 ZNF414Q96IQ9 312 aa16.37■□□□□ 0.21
RARA-201ENST00000254066 SELENOKQ9Y6D0 94 aa16.37■□□□□ 0.21
RARA-201ENST00000254066 A4D1N5 150 aa16.37■□□□□ 0.21
RARA-201ENST00000254066 CACNG7P62955 275 aa16.37■□□□□ 0.21
RARA-201ENST00000254066 U3KQK5 164 aa16.37■□□□□ 0.21
RARA-201ENST00000254066 SPTBN2O15020 2390 aa16.37■□□□□ 0.21
RARA-201ENST00000254066 TMEM8BA6NDV4 472 aa16.36■□□□□ 0.21
RARA-201ENST00000254066 FBLL1A6NHQ2 334 aaKnown RBP16.36■□□□□ 0.21
RARA-201ENST00000254066 NTN3O00634 580 aaPredicted RBP16.36■□□□□ 0.21
RARA-201ENST00000254066 LEAP2Q969E1 77 aa16.36■□□□□ 0.21
RARA-201ENST00000254066 Q9H3A6 140 aa16.36■□□□□ 0.21
RARA-201ENST00000254066 HOXB4P17483 251 aaPredicted RBP16.36■□□□□ 0.21
RARA-201ENST00000254066 RAX2Q96IS3 184 aa16.36■□□□□ 0.21
RARA-201ENST00000254066 SPAARA0A1B0GVQ0 90 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 HBDP02042 147 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 FCGR2BP31994 310 aaPredicted RBP16.35■□□□□ 0.21
RARA-201ENST00000254066 OTORQ9NRC9 128 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 PCNX2A6NKB5 2137 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 CNIH1O95406 144 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 IGKV1-16P04430 117 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 ARMS2P0C7Q2 107 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 GP9P14770 177 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 IGHV1-2P23083 117 aa16.35■□□□□ 0.21
RARA-201ENST00000254066 IFI27P40305 119 aaPredicted RBP16.35■□□□□ 0.21
RARA-201ENST00000254066 MBNL2Q5VZF2 373 aaKnown RBP16.35■□□□□ 0.21
RARA-201ENST00000254066 PHLDA1Q8WV24 401 aaPredicted RBP16.35■□□□□ 0.21
RARA-201ENST00000254066 IGKV3-15P01624 115 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 ID1P41134 155 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 C3AR1Q16581 482 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 IFI27L1Q96BM0 104 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 LINC00574Q9H8X3 128 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 SSUH2Q9Y2M2 353 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 KLK10O43240 276 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 SRSF1Q07955 248 aaKnown RBP eCLIP16.34■□□□□ 0.21
RARA-201ENST00000254066 UTF1Q5T230 341 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 TMEM116Q8NCL8 245 aa16.34■□□□□ 0.21
RARA-201ENST00000254066 NMUP48645 174 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 PCP2Q8IVA1 136 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 BCL6BQ8N143 479 aaPredicted RBP16.33■□□□□ 0.2
RARA-201ENST00000254066 ZNRF1Q8ND25 227 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 TRGV9Q99603 122 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 SCNM1Q9BWG6 230 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 MRPL16Q9NX20 251 aaKnown RBP16.33■□□□□ 0.2
RARA-201ENST00000254066 MSRB2Q9Y3D2 182 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 E9PLD3 99 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 OR10X1Q8NGY0 326 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 TM2D2Q9BX73 214 aa16.33■□□□□ 0.2
RARA-201ENST00000254066 A0A1W2PRD5 423 aa16.32■□□□□ 0.2
RARA-201ENST00000254066 A0A1W2PRF3 423 aa16.32■□□□□ 0.2
RARA-201ENST00000254066 A0A1W2PRM7 423 aa16.32■□□□□ 0.2
RARA-201ENST00000254066 RPL32P62910 135 aaKnown RBP16.32■□□□□ 0.2
RARA-201ENST00000254066 PAX8Q06710 450 aa16.32■□□□□ 0.2
RARA-201ENST00000254066 ZNF788Q6ZQV5 615 aa16.32■□□□□ 0.2
RARA-201ENST00000254066 LAMA1P25391 3075 aa16.32■□□□□ 0.2
RARA-201ENST00000254066 PLAUP00749 431 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 HLA-DRB4P13762 266 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 CIARTQ8N365 385 aaPredicted RBP16.31■□□□□ 0.2
RARA-201ENST00000254066 HES7Q9BYE0 225 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 HLA-DRB4X5D2U9 266 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 NKX2-8O15522 239 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 IGLV2-11P01706 119 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 ORM2P19652 201 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 GCSHP23434 173 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 TMEM167AQ8TBQ9 72 aa16.31■□□□□ 0.2
RARA-201ENST00000254066 SRSF12Q8WXF0 261 aaKnown RBP16.31■□□□□ 0.2
RARA-201ENST00000254066 FXYD2P54710 66 aa16.3■□□□□ 0.2
RARA-201ENST00000254066 ZNF502Q8TBZ5 544 aa16.3■□□□□ 0.2
RARA-201ENST00000254066 PCSK5Q92824 1860 aa16.3■□□□□ 0.2
RARA-201ENST00000254066 THBDP07204 575 aa16.3■□□□□ 0.2
RARA-201ENST00000254066 FAM106CPP0CH98 169 aa16.3■□□□□ 0.2
RARA-201ENST00000254066 GAGE5Q13069 117 aa16.3■□□□□ 0.2
RARA-201ENST00000254066 GAGE6Q13070 117 aa16.3■□□□□ 0.2
RARA-201ENST00000254066 LINC01559Q495D7 138 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms