RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 GOLT1AQ6ZVE7 132 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 BCL6BQ8N143 479 aaPredicted RBP15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 CIARTQ8N365 385 aaPredicted RBP15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 RNF125Q96EQ8 232 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 HIVEP3Q5T1R4 2406 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 WNK2Q9Y3S1 2297 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 TRBV19A0A075B6N1 114 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 ZNF324O75467 553 aaPredicted RBP15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 P01737 135 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 IGLC2P0DOY2 106 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 HOXB4P17483 251 aaPredicted RBP15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 Q8N976 141 aa15.38■□□□□ 0.05
CDC42EP1-201ENST00000249014 IGLV11-55A0A075B6I3 123 aa15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 PRB4P10163 310 aaPredicted RBP15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 KRTDAPP60985 99 aa15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 ZNF562Q6V9R5 426 aa15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 C1orf122Q6ZSJ8 110 aa15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 ATP5L2Q7Z4Y8 100 aa15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 BPIFA4PQ86YQ2 179 aa15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 FAM19A2Q8N3H0 131 aa15.37■□□□□ 0.05
CDC42EP1-201ENST00000249014 WI2-2373I1.2A0A1W2PRP0 233 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 NCBP2LA6PVI3 153 aaKnown RBP15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 LY6DQ14210 128 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 CT83Q5H943 113 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 PRNTQ86SH4 94 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 Q8N6K4 173 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 ARPC1AQ92747 370 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 NPIPB5A8MRT5 1133 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 A8MWL6 223 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 F8W735 103 aaPredicted RBP15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 MRPS12O15235 138 aaKnown RBP15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 OR2J3O76001 311 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 NIT1Q86X76 327 aa15.36■□□□□ 0.05
CDC42EP1-201ENST00000249014 GNG7O60262 68 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 SIGLEC15Q6ZMC9 328 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 KIR3DL3Q8N743 410 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 OR2D3Q8NGH3 330 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 C2orf88Q9BSF0 95 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 ALKBH7Q9BT30 221 aaPredicted RBP15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 ZNF785A8K8V0 405 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 EREGO14944 169 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 FCGR2BP31994 310 aaPredicted RBP15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 CCDC144NLQ6NUI1 221 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 OR4F17Q8NGA8 305 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 DAZAP1Q96EP5 407 aaKnown RBP15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 PGLYRP4Q96LB8 373 aa15.35■□□□□ 0.05
CDC42EP1-201ENST00000249014 MED13LQ71F56 2210 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 NPIPB6E9PJ23 425 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 HLA-DRB1P01911 266 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 HBBP68871 147 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 ASCL2Q99929 193 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 PAM16Q9Y3D7 125 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 KLF5Q13887 457 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 LBHQ53QV2 105 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 TTC9CQ8N5M4 171 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 SIRPDQ9H106 197 aa15.34■□□□□ 0.05
CDC42EP1-201ENST00000249014 CHD8Q9HCK8 2581 aa15.33■□□□□ 0.04
CDC42EP1-201ENST00000249014 EBI3Q14213 229 aa15.33■□□□□ 0.04
CDC42EP1-201ENST00000249014 ZNF414Q96IQ9 312 aa15.33■□□□□ 0.04
CDC42EP1-201ENST00000249014 NCOR2Q9Y618 2525 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 TRAV30A0A087WSZ9 112 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 DIRC3C9JPN6 131 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 IGHV3-23P01764 117 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 NTF3P20783 257 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 COL8A1P27658 744 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 MFAP4P55083 255 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 MINOS1Q5TGZ0 78 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 C20orf144Q9BQM9 153 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 GFRA4Q9GZZ7 299 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 MINOS1-NBL1R4GNA1 71 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 OOSP1A8MZH6 123 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 ZNF48Q96MX3 618 aaPredicted RBP15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 VAMP8Q9BV40 100 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 SNHG12Q9BXW3 62 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 UBTD1Q9HAC8 227 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 RNF24Q9Y225 148 aa15.32■□□□□ 0.04
CDC42EP1-201ENST00000249014 TRBV6-1A0A0K0K1D8 114 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 NDUFB8O95169 186 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 C3orf79P0CE67 100 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 EGR2P11161 476 aaPredicted RBP15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 TMEM11P17152 192 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 Q56UQ5 140 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 RBPMS2Q6ZRY4 209 aaKnown RBP15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 TMEM75Q8N9X5 138 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 ZC2HC1AQ96GY0 325 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 M0R3E3 92 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 C16orf54Q6UWD8 224 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 LYPD1Q8N2G4 141 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 C21orf62Q9NYP8 219 aa15.31■□□□□ 0.04
CDC42EP1-201ENST00000249014 ITPR1Q14643 2758 aa15.3■□□□□ 0.04
CDC42EP1-201ENST00000249014 IGHV7-81A0A0B4J1V7 117 aa15.3■□□□□ 0.04
CDC42EP1-201ENST00000249014 OVOL3O00110 214 aa15.3■□□□□ 0.04
CDC42EP1-201ENST00000249014 SOX21Q9Y651 276 aaPredicted RBP15.3■□□□□ 0.04
CDC42EP1-201ENST00000249014 FAM120AOSQ5T036 256 aa15.29■□□□□ 0.04
CDC42EP1-201ENST00000249014 AJUBAQ96IF1 538 aa15.29■□□□□ 0.04
CDC42EP1-201ENST00000249014 FAM231BA6NCW3 169 aa15.29■□□□□ 0.04
CDC42EP1-201ENST00000249014 RNF224P0DH78 156 aa15.29■□□□□ 0.04
CDC42EP1-201ENST00000249014 PSG3Q16557 428 aa15.29■□□□□ 0.04
CDC42EP1-201ENST00000249014 Q8N9W7 124 aa15.29■□□□□ 0.04
CDC42EP1-201ENST00000249014 URB1-AS1Q96HZ7 61 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms