RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 LTAP01374 205 aa17.32■□□□□ 0.36
RNF39-201ENST00000244360 FBLN7Q53RD9 439 aa17.32■□□□□ 0.36
RNF39-201ENST00000244360 FAM19A2Q8N3H0 131 aa17.32■□□□□ 0.36
RNF39-201ENST00000244360 LYZP61626 148 aa17.31■□□□□ 0.36
RNF39-201ENST00000244360 HBBP68871 147 aa17.31■□□□□ 0.36
RNF39-201ENST00000244360 VMO1Q7Z5L0 202 aa17.31■□□□□ 0.36
RNF39-201ENST00000244360 PRSS22Q9GZN4 317 aa17.31■□□□□ 0.36
RNF39-201ENST00000244360 GFRA4Q9GZZ7 299 aa17.31■□□□□ 0.36
RNF39-201ENST00000244360 COL5A1-AS1Q5SY13 56 aa17.31■□□□□ 0.36
RNF39-201ENST00000244360 CCDC144NLQ6NUI1 221 aa17.31■□□□□ 0.36
RNF39-201ENST00000244360 SLC25A39Q9BZJ4 359 aaPredicted RBP17.31■□□□□ 0.36
RNF39-201ENST00000244360 IGLC2P0DOY2 106 aa17.3■□□□□ 0.36
RNF39-201ENST00000244360 IGLC3P0DOY3 106 aa17.3■□□□□ 0.36
RNF39-201ENST00000244360 ZFP36P26651 326 aaKnown RBP17.3■□□□□ 0.36
RNF39-201ENST00000244360 MINOS1Q5TGZ0 78 aa17.3■□□□□ 0.36
RNF39-201ENST00000244360 LEMD1Q68G75 181 aa17.3■□□□□ 0.36
RNF39-201ENST00000244360 Q8N6K4 173 aa17.3■□□□□ 0.36
RNF39-201ENST00000244360 IGFBPL1Q8WX77 278 aa17.3■□□□□ 0.36
RNF39-201ENST00000244360 MINOS1-NBL1R4GNA1 71 aa17.3■□□□□ 0.36
RNF39-201ENST00000244360 C20orf202A1L168 122 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 DLEU1O43261 78 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 P01737 135 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 TCRAP04437 139 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 HOXB4P17483 251 aaPredicted RBP17.29■□□□□ 0.36
RNF39-201ENST00000244360 CD24P25063 80 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 Q9H3A6 140 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 LPAR2Q9HBW0 351 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 COL6A6A6NMZ7 2263 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 FAM231BA6NCW3 169 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 FAM181BA6NEQ2 426 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 M0R2Z0 102 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 EBI3Q14213 229 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 DYNAPQ8N1N2 210 aa17.29■□□□□ 0.36
RNF39-201ENST00000244360 HIVEP3Q5T1R4 2406 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 A0A1W2PRD5 423 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 A0A1W2PRF3 423 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 A0A1W2PRM7 423 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 C19orf71A6NCJ1 209 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 CAMPP49913 170 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 SIRPDQ9H106 197 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 RPH3ALQ9UNE2 315 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 NPIPB5A8MRT5 1133 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 HES1Q14469 280 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 ASPHD1Q5U4P2 390 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 ZNF562Q6V9R5 426 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 DAZAP1Q96EP5 407 aaKnown RBP17.28■□□□□ 0.36
RNF39-201ENST00000244360 TXN2Q99757 166 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 TMEM208Q9BTX3 173 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 OTORQ9NRC9 128 aa17.28■□□□□ 0.36
RNF39-201ENST00000244360 NDUFS7O75251 213 aa17.27■□□□□ 0.36
RNF39-201ENST00000244360 BTF3P20290 206 aaKnown RBP17.27■□□□□ 0.36
RNF39-201ENST00000244360 RNASEKQ6P5S7 137 aaKnown RBP17.27■□□□□ 0.36
RNF39-201ENST00000244360 ITLN2Q8WWU7 325 aaPredicted RBP17.27■□□□□ 0.36
RNF39-201ENST00000244360 TACC2O95359 2948 aa17.27■□□□□ 0.36
RNF39-201ENST00000244360 HNRNPA3P51991 378 aaKnown RBP17.27■□□□□ 0.35
RNF39-201ENST00000244360 SHANK2-AS3Q9BTD1 123 aa17.27■□□□□ 0.35
RNF39-201ENST00000244360 ABCA1O95477 2261 aa17.27■□□□□ 0.35
RNF39-201ENST00000244360 BATFQ16520 125 aa17.26■□□□□ 0.35
RNF39-201ENST00000244360 ZNF48Q96MX3 618 aaPredicted RBP17.26■□□□□ 0.35
RNF39-201ENST00000244360 SSBP4Q9BWG4 385 aaPredicted RBP17.26■□□□□ 0.35
RNF39-201ENST00000244360 IGLV11-55A0A075B6I3 123 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 VWC2LB2RUY7 222 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 H3BRN7 92 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 EFNA4P52798 201 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 Q6ZN92 141 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 OR2D3Q8NGH3 330 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 ARPC1AQ92747 370 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 FANCD2OSQ96PS1 177 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 CHD8Q9HCK8 2581 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 TRBV6-1A0A0K0K1D8 114 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 CYB5R2Q6BCY4 276 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 RBPMS2Q6ZRY4 209 aaKnown RBP17.25■□□□□ 0.35
RNF39-201ENST00000244360 TCF24Q7RTU0 167 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 CHCHD1Q96BP2 118 aaKnown RBP17.25■□□□□ 0.35
RNF39-201ENST00000244360 UBTD1Q9HAC8 227 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 GOLT1BQ9Y3E0 138 aa17.25■□□□□ 0.35
RNF39-201ENST00000244360 H3BTX0 84 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 NDPQ00604 133 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 TTC9CQ8N5M4 171 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 SGK494Q96LW2 274 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 TRAV9-2A0A087WT02 112 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 NPIPB6E9PJ23 425 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 Q86TA4 180 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 ZNF491Q8N8L2 437 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 RNF24Q9Y225 148 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 NCOR2Q9Y618 2525 aa17.24■□□□□ 0.35
RNF39-201ENST00000244360 SPTBN1Q01082 2364 aaKnown RBP17.24■□□□□ 0.35
RNF39-201ENST00000244360 DMRTA1Q5VZB9 504 aa17.23■□□□□ 0.35
RNF39-201ENST00000244360 LINC00322Q6ZN03 302 aaPredicted RBP17.23■□□□□ 0.35
RNF39-201ENST00000244360 TRAV30A0A087WSZ9 112 aa17.23■□□□□ 0.35
RNF39-201ENST00000244360 IGHV2-70DA0A0C4DH43 119 aa17.23■□□□□ 0.35
RNF39-201ENST00000244360 WI2-2373I1.2A0A1W2PRP0 233 aa17.23■□□□□ 0.35
RNF39-201ENST00000244360 LINC00614P0C842 121 aa17.23■□□□□ 0.35
RNF39-201ENST00000244360 KLF17Q5JT82 389 aaPredicted RBP17.23■□□□□ 0.35
RNF39-201ENST00000244360 GTSF1Q8WW33 167 aa17.23■□□□□ 0.35
RNF39-201ENST00000244360 RNF125Q96EQ8 232 aa17.23■□□□□ 0.35
RNF39-201ENST00000244360 C2orf70A6NJV1 201 aa17.22■□□□□ 0.35
RNF39-201ENST00000244360 EBLN2Q6P2I7 272 aa17.22■□□□□ 0.35
RNF39-201ENST00000244360 C1RLQ9NZP8 487 aa17.22■□□□□ 0.35
RNF39-201ENST00000244360 LAMTOR2Q9Y2Q5 125 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms