RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RASL11BQ9BPW5 248 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 SSBP4Q9BWG4 385 aaPredicted RBP17.56■□□□□ 0.4
CCDC9-201ENST00000221922 UQCR10Q9UDW1 63 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 IGLC2P0DOY2 106 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 IGLC3P0DOY3 106 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 CAMPP49913 170 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 KLRD1Q13241 179 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 CCDC144NLQ6NUI1 221 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 RBM14Q96PK6 669 aaKnown RBP17.56■□□□□ 0.4
CCDC9-201ENST00000221922 Q9H3A6 140 aa17.56■□□□□ 0.4
CCDC9-201ENST00000221922 ARHGAP32A7KAX9 2087 aa17.55■□□□□ 0.4
CCDC9-201ENST00000221922 HSBP1O75506 76 aa17.55■□□□□ 0.4
CCDC9-201ENST00000221922 PSG1P11464 419 aa17.55■□□□□ 0.4
CCDC9-201ENST00000221922 SPTBN1Q01082 2364 aaKnown RBP17.55■□□□□ 0.4
CCDC9-201ENST00000221922 SOX21Q9Y651 276 aaPredicted RBP17.55■□□□□ 0.4
CCDC9-201ENST00000221922 A8MWL6 223 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 HBBP68871 147 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 RPH3ALQ9UNE2 315 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 FAM181BA6NEQ2 426 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 OOSP1A8MZH6 123 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 EFNA4P52798 201 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 LYZP61626 148 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 PMCHL1Q16048 86 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 TCF24Q7RTU0 167 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 TMEM208Q9BTX3 173 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 GFRA4Q9GZZ7 299 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 GSX1Q9H4S2 264 aaPredicted RBP17.54■□□□□ 0.4
CCDC9-201ENST00000221922 TMEM14CQ9P0S9 112 aa17.54■□□□□ 0.4
CCDC9-201ENST00000221922 C19orf84I3L1E1 186 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 FOSL1P15407 271 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 GAGE1Q13065 139 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 LEMD1Q68G75 181 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 GTSF1Q8WW33 167 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 TMEM190Q8WZ59 177 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 LPAR2Q9HBW0 351 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 PKD1L2Q7Z442 2459 aa17.53■□□□□ 0.4
CCDC9-201ENST00000221922 NDUFS7O75251 213 aa17.52■□□□□ 0.4
CCDC9-201ENST00000221922 P01737 135 aa17.52■□□□□ 0.4
CCDC9-201ENST00000221922 C5orf64Q2M2E5 130 aa17.52■□□□□ 0.4
CCDC9-201ENST00000221922 OTORQ9NRC9 128 aa17.52■□□□□ 0.4
CCDC9-201ENST00000221922 K7EIM0 57 aa17.52■□□□□ 0.39
CCDC9-201ENST00000221922 M0R2Z0 102 aa17.52■□□□□ 0.39
CCDC9-201ENST00000221922 HES1Q14469 280 aa17.52■□□□□ 0.39
CCDC9-201ENST00000221922 KLHDC1Q8N7A1 406 aa17.52■□□□□ 0.39
CCDC9-201ENST00000221922 DLEU1O43261 78 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 MINOS1Q5TGZ0 78 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 EBLN2Q6P2I7 272 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 OR2D3Q8NGH3 330 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 SLC25A39Q9BZJ4 359 aaPredicted RBP17.51■□□□□ 0.39
CCDC9-201ENST00000221922 MINOS1-NBL1R4GNA1 71 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 FAM231BA6NCW3 169 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 NPIPB6E9PJ23 425 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 COL5A1-AS1Q5SY13 56 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 FAM162BQ5T6X4 162 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 RNASEKQ6P5S7 137 aaKnown RBP17.51■□□□□ 0.39
CCDC9-201ENST00000221922 VMO1Q7Z5L0 202 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 URB1-AS1Q96HZ7 61 aa17.51■□□□□ 0.39
CCDC9-201ENST00000221922 C2orf70A6NJV1 201 aa17.5■□□□□ 0.39
CCDC9-201ENST00000221922 H3BTX0 84 aa17.5■□□□□ 0.39
CCDC9-201ENST00000221922 IGKV1-17P01599 117 aa17.5■□□□□ 0.39
CCDC9-201ENST00000221922 ZFP36P26651 326 aaKnown RBP17.5■□□□□ 0.39
CCDC9-201ENST00000221922 LCN12Q6JVE5 192 aa17.5■□□□□ 0.39
CCDC9-201ENST00000221922 HOXB4P17483 251 aaPredicted RBP17.49■□□□□ 0.39
CCDC9-201ENST00000221922 BTF3P20290 206 aaKnown RBP17.49■□□□□ 0.39
CCDC9-201ENST00000221922 RBPMS2Q6ZRY4 209 aaKnown RBP17.49■□□□□ 0.39
CCDC9-201ENST00000221922 Q86TA4 180 aa17.49■□□□□ 0.39
CCDC9-201ENST00000221922 BATFQ16520 125 aa17.49■□□□□ 0.39
CCDC9-201ENST00000221922 RNF24Q9Y225 148 aa17.49■□□□□ 0.39
CCDC9-201ENST00000221922 NPIPB5A8MRT5 1133 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 IGLV2-11P01706 119 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 ZNF562Q6V9R5 426 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 DAZAP1Q96EP5 407 aaKnown RBP17.48■□□□□ 0.39
CCDC9-201ENST00000221922 TRBV6-1A0A0K0K1D8 114 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 A0A1W2PRD5 423 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 A0A1W2PRF3 423 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 A0A1W2PRM7 423 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 CD24P25063 80 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 Q6ZN92 141 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 PGLYRP4Q96LB8 373 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 TXN2Q99757 166 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 SIRPDQ9H106 197 aa17.48■□□□□ 0.39
CCDC9-201ENST00000221922 ABCA1O95477 2261 aa17.47■□□□□ 0.39
CCDC9-201ENST00000221922 TRAV30A0A087WSZ9 112 aa17.47■□□□□ 0.39
CCDC9-201ENST00000221922 TRAV9-2A0A087WT02 112 aa17.47■□□□□ 0.39
CCDC9-201ENST00000221922 C20orf202A1L168 122 aa17.47■□□□□ 0.39
CCDC9-201ENST00000221922 C16orf54Q6UWD8 224 aa17.47■□□□□ 0.39
CCDC9-201ENST00000221922 ARPC1AQ92747 370 aa17.47■□□□□ 0.39
CCDC9-201ENST00000221922 EBI3Q14213 229 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 S100A7AQ86SG5 101 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 ATOH7Q8N100 152 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 OVOL3O00110 214 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 HNRNPA3P51991 378 aaKnown RBP17.46■□□□□ 0.39
CCDC9-201ENST00000221922 MAJINQ3KP22 176 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 FAM120AOSQ5T036 256 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 Q8N6K4 173 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 CHCHD1Q96BP2 118 aaKnown RBP17.46■□□□□ 0.39
CCDC9-201ENST00000221922 SHANK2-AS3Q9BTD1 123 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 LAMTOR2Q9Y2Q5 125 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 GOLT1BQ9Y3E0 138 aa17.46■□□□□ 0.39
CCDC9-201ENST00000221922 IGHV2-70DA0A0C4DH43 119 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms