RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 LY75O60449 1722 aa8.59□□□□□ -1.03
TRPS1-201ENST00000220888 SPTAN1Q13813 2472 aaKnown RBP8.59□□□□□ -1.03
TRPS1-201ENST00000220888 WISP1O95388 367 aa8.59□□□□□ -1.03
TRPS1-201ENST00000220888 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
TRPS1-201ENST00000220888 TNFRSF6BO95407 300 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 TCRAP04437 139 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 FOXL1Q12952 345 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 TCTEX1D4Q5JR98 221 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 ZNF362Q5T0B9 420 aaPredicted RBP8.58□□□□□ -1.04
TRPS1-201ENST00000220888 TMEM158Q8WZ71 300 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 ARFGEF3Q5TH69 2177 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 FOCADQ5VW36 1801 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV1-12A0A0C4DH73 117 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 KNCNA6PVL3 124 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV1D-12P01611 117 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 AZU1P20160 251 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 LYZL1Q6UWQ5 148 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 IGFL3Q6UXB1 125 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 LY6G5BQ8NDX9 201 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 OVOL2Q9BRP0 275 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 SH2D1AO60880 128 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 CFHR2P36980 270 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 ZNF562Q6V9R5 426 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 DKK4Q9UBT3 224 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 F8VVB4 439 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 F8VWA3 439 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 IFITM3Q01628 133 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV1D-17A0A075B6S4 117 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 ITGB1BP1O14713 200 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 ID3Q02535 119 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 THAP8Q8NA92 274 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 LIME1Q9H400 295 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 UBE2BP63146 152 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 SPINK13Q1W4C9 94 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 Q5BKY6 102 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 LYPD1Q8N2G4 141 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 TRAV8-4A0A0B4J246 113 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 DOCK3Q8IZD9 2030 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 KLF5Q13887 457 aaPredicted RBP8.57□□□□□ -1.04
TRPS1-201ENST00000220888 GLRX5Q86SX6 157 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
TRPS1-201ENST00000220888 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 DKK1O94907 266 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
TRPS1-201ENST00000220888 CHCHD1Q96BP2 118 aaKnown RBP8.57□□□□□ -1.04
TRPS1-201ENST00000220888 CACNA1DQ01668 2161 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 SERF1AO75920 110 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 HIST1H4AP62805 103 aaKnown RBP8.56□□□□□ -1.04
TRPS1-201ENST00000220888 TSSC4Q9Y5U2 329 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-201ENST00000220888 MTCL1Q9Y4B5 1905 aaKnown RBP8.56□□□□□ -1.04
TRPS1-201ENST00000220888 PIKFYVEQ9Y2I7 2098 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 ATAD5Q96QE3 1844 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 D6R8Y8 96 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 H3BUT2 72 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 PRSS33Q8NF86 280 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 ZFC3H1O60293 1989 aaKnown RBP8.56□□□□□ -1.04
TRPS1-201ENST00000220888 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 ANXA2RQ3ZCQ2 193 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 SUMO4Q6EEV6 95 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 TRAV3A0A0B4J244 114 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 HGFACQ04756 655 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 TMEM256Q8N2U0 113 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 TIMM21Q9BVV7 248 aa8.56□□□□□ -1.04
TRPS1-201ENST00000220888 ELANEP08246 267 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 SLAQ13239 276 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 TBX6O95947 436 aaPredicted RBP8.55□□□□□ -1.04
TRPS1-201ENST00000220888 CSRP3P50461 194 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 DEFB113Q30KQ7 82 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 DICER1Q9UPY3 1922 aaKnown RBP8.55□□□□□ -1.04
TRPS1-201ENST00000220888 A0A087WWC5 75 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 A8MWV9 139 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 RBMY1FQ15415 496 aaKnown RBP8.55□□□□□ -1.04
TRPS1-201ENST00000220888 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 NBASA2RRP1 2371 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 A0A1B0GUS0 222 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 NIT1Q86X76 327 aa8.55□□□□□ -1.04
TRPS1-201ENST00000220888 TEX48A0A1B0GUV7 120 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 SHISA3A0PJX4 238 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 ADMP35318 185 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 SPOCK3Q9BQ16 436 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 SPATA31B1PQ5VZV4 182 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 ZNF625Q96I27 306 aaPredicted RBP8.54□□□□□ -1.04
TRPS1-201ENST00000220888 IGF2BP2-AS1Q96M15 143 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 G3V318 75 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 C21orf62-AS1Q17RA5 79 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 C9orf66Q5T8R8 295 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 SPXQ9BT56 116 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 USF3Q68DE3 2245 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 A8MXK9 166 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 B3GALT5-AS1P59052 145 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 TET1Q8NFU7 2136 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 GNB1LQ9BYB4 327 aa8.54□□□□□ -1.04
TRPS1-201ENST00000220888 KLK9Q9UKQ9 250 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms