RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Wdr1O88342 606 aaKnown RBP10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Rps16P14131 146 aaKnown RBP10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Dlx4P70436 240 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Nkpd1Q0VF94 599 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Tmem184aQ3UFJ6 425 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 A230072I06RikQ3UUJ8 172 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Dhrs13Q5SS80 376 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 HrasQ61411 189 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 TpppQ7TQD2 218 aaKnown RBP10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Vmn1r70Q8R254 298 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Rwdd3Q8VIL2 267 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Scp2d1Q9DAH1 156 aa10.83□□□□□ -0.68
Nup88-203ENSMUST00000108531 Trav12d-1A0N8R0 115 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Meox1P32442 253 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Efna2P52801 209 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Tubg1P83887 451 aaKnown RBP10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Rac2Q05144 192 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 BC147527Q3V185 167 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr141Q60880 325 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 H1fooQ8VIK3 304 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Rnaseh2cQ9CQ18 166 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Jmjd1cQ69ZK6 2350 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm20773A0A0A6YXW2 232 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm20807A0A0A6YXX7 232 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Igkv6-23A0A140T8N5 115 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 C2cd4aE9Q861 334 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm21719J3KMI9 230 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm20873J3QMQ9 232 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm20795J3QP49 232 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm21310J3QQ23 232 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 SdcbpO08992 299 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Ube2nP61089 152 aaKnown RBP10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Pfn1P62962 140 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Ccl7Q03366 97 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm21440Q3TTD8 232 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Rnf224Q3UIW8 156 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Lypd6Q8BPP5 171 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr1448Q8VFX1 314 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr715Q8VG49 315 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Rab29Q91YQ1 204 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Nkx6-1Q99MA9 365 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Tm2d1Q99MB3 208 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Ndufb10Q9DCS9 176 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Tmem183Q9JJB9 375 aa10.82□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm42420A0A0J9YUQ2 99 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Col9a1Q05722 921 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Zfp72Q0VFY0 435 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Tbpl2Q6SJ95 350 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Znrf2Q71FD5 238 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr924Q7TRB8 308 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr43Q7TRX1 313 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr403Q7TRX2 313 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Slc24a4Q8CGQ8 622 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Mpv17lQ99MS3 194 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Vsig2Q9Z109 328 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Lrrc37aB1AWG4 3215 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Cfap46E9Q2C0 2641 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Ighv5-4A0A075B5P9 117 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 BC053393A0A0B4J1F6 192 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr284A0A0U1RP76 321 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr1326-ps1A0A140T8J7 311 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr282A1L1B4 308 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Zfp971A2BFG8 470 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Arl16B1ATY8 173 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm14288E9Q9W0 88 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Mpv17P19258 176 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Cd59bP58019 129 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 AesP63002 197 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Spock1Q62288 442 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm17324Q8C6J8 137 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Spsb4Q8R5B6 273 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr137Q8VFC2 312 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Anapc16Q9CPV2 110 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Kcnmb2Q9CZM9 235 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Tex36Q9D5N9 219 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Cd200r1Q9ES57 326 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Herpud1Q9JJK5 391 aa10.81□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm20532G3UXR8 106 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Syngr2O55101 224 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 EnsaP60840 121 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Wnt10aP70701 417 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 HaaoQ78JT3 286 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr874Q7TRE6 310 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gpbar1Q80SS6 329 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Q8CF25 301 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Sfxn4Q925N1 313 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Ms4a4cQ9D3F6 226 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm42791D3YYB5 209 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm5239D3YYZ2 122 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Wdr86D3Z757 380 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Adamts17E9Q4D1 1122 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 P01655 112 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Zfp970Q08BU3 522 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm11232Q5SPI8 295 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Cdc34Q8CFI2 235 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Lrrc20Q8CI70 184 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Coa3Q9D2R6 108 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Cmtm2bQ9DAC0 210 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Olfr894Q9EQB2 313 aa10.8□□□□□ -0.68
Nup88-203ENSMUST00000108531 Gm7173A0A0G2JEB6 3132 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 94.6 ms