RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 BatfO35284 125 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Plk3Q60806 631 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Tox3Q80W03 575 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Rnf24Q8BGI1 148 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Phf13Q8K2W6 296 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Sco2Q8VCL2 255 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr492Q8VFD1 314 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr1233Q8VGN0 305 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Anapc16Q9CPV2 110 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Nicn1Q9CQM0 213 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Cby1Q9D1C2 127 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Wbp2nlQ9D529 359 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Myo9bQ9QY06 2114 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Cbln1Q9R171 193 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 CadB2RQC6 2225 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Ahctf1Q8CJF7 2243 aaKnown RBP10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 AU041133A0A0J9YVH3 498 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr1293-psA0A1L1SVB5 326 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gm14412A2ARR7 526 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Sertad4A7DTG3 377 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Hist1h2bfP10853 126 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 P18529 117 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Taar9Q5QD04 348 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Hist1h2bbQ64475 126 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 LgalslbQ7TPX9 165 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Tmprss11fQ8BHM9 439 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Hist1h2bkQ8CGP1 126 aaKnown RBP10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Hist1h2bpQ8CGP2 126 aaKnown RBP10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr1457Q8VFK3 317 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Sf3b5Q923D4 86 aaKnown RBP10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Smim8Q9CQQ0 97 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gpm6bP35803 328 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Rnf122Q8BP31 155 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Syt13Q9EQT6 426 aa10.89□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Greb1Q3UHK3 1954 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gm6904E9PVF1 202 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gm21310J3QQ23 232 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Ctsll3Q3ULP7 331 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Ido2Q8R0V5 405 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr495Q8VF12 330 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Ctag2Q9D9S4 219 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 HcstQ9QUJ0 79 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Opn4Q9QXZ9 521 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 SonQ9QX47 2444 aaKnown RBP10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Ighv1-42A0A0A6YY38 117 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Zfp931A2AHM2 298 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Cln5Q3UMW8 341 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Obox7Q4KL20 218 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Zfp874bQ7M6X2 447 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Cbln4Q8BME9 198 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Cysltr2Q920A1 309 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 TecrQ9CY27 308 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Mki67E9PVX6 3177 aaKnown RBP10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 F2rl2O08675 369 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Khdc1bP0C7A0 126 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Tmem52bQ0VBF2 186 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Ceacam9Q78T27 234 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Hist3h2bbQ8CGP0 126 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Degs2Q8R2F2 323 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Hist3h2baQ9D2U9 126 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr19Q9JHB2 309 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Kcnip2Q9JJ69 270 aa10.88□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gm4884E9PVP9 694 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr869E9PX82 323 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Tex54G3UW99 86 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Oprk1P33534 380 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Cd200r3Q5UKY4 296 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Nhlh2Q64221 135 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 2210407C18RikQ6YI28 220 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr753-ps1A0A140LHN3 164 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr175-ps1A0A140T8K4 308 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 GlulP15105 373 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 MpgQ04841 333 aaKnown RBP10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Susd2Q9DBX3 820 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Igkv1-133A0A0B4J1H8 120 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gm20403G3UYB0 123 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gnb1P62874 340 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Mpc1P63030 109 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Tlcd2Q8VC26 310 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Mpv17lQ99MS3 194 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 AmtnQ9D3J8 213 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Dmrtc1c1Q9D410 238 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Pxmp4Q9JJW0 212 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Szt2A2A9C3 3431 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gm39566A0A1B0GT45 1251 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Zfp108E9Q8I5 642 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Gm8677K9J7G9 307 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Rdh16O54909 317 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 UcnP81615 122 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Psg27Q497W2 474 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Il12rb1Q60837 738 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Scgb2b24Q7M747 112 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Olfr874Q7TRE6 310 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 D730048I06RikQ9CQB8 106 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Polr3kQ9CQZ7 108 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Arl13aQ9D416 372 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Q9DAA3 117 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Cxcr6Q9EQ16 351 aa10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Srsf10Q9R0U0 262 aaKnown RBP10.87□□□□□ -0.67
Clcn3-201ENSMUST00000004430 Dock4P59764 1978 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms