RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	TUB4	P53378	473 aa		11.08	□□□□□ -0.64
YSP3	YOR003W	BIO5	P53744	561 aa	Known RBP	11.08	□□□□□ -0.64
YSP3	YOR003W	YNL040W	P53960	456 aa	Predicted RBP	11.08	□□□□□ -0.64
YSP3	YOR003W	UFO1	Q04511	668 aa		11.08	□□□□□ -0.64
YSP3	YOR003W	AAD4	Q07747	329 aa		11.08	□□□□□ -0.64
YSP3	YOR003W	HSF1	P10961	833 aa		11.07	□□□□□ -0.64
YSP3	YOR003W	MET16	P18408	261 aa	Predicted RBP	11.07	□□□□□ -0.64
YSP3	YOR003W	YBL055C	P34220	418 aa	Predicted RBP	11.07	□□□□□ -0.64
YSP3	YOR003W	KTR4	P38131	464 aa		11.07	□□□□□ -0.64
YSP3	YOR003W	CAJ1	P39101	391 aa		11.07	□□□□□ -0.64
YSP3	YOR003W	BTN2	P53286	410 aa		11.07	□□□□□ -0.64
YSP3	YOR003W	ARA2	Q04212	335 aa		11.07	□□□□□ -0.64
YSP3	YOR003W	YMR114C	Q04471	368 aa	Known RBP	11.07	□□□□□ -0.64
YSP3	YOR003W	YLR462W	O13556	202 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	HXT3	P32466	567 aa	Known RBP	11.06	□□□□□ -0.64
YSP3	YOR003W	SRB4	P32569	687 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	STE5	P32917	917 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	YHL049C	P38722	271 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	YFL064C	P43540	174 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	YJR079W	P47126	109 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	PEX31	P53203	462 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	TOF2	Q02208	771 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	RPN4	Q03465	531 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	ECM38	Q05902	660 aa	Predicted RBP	11.06	□□□□□ -0.64
YSP3	YOR003W	VAC14	Q06708	880 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	11.06	□□□□□ -0.64	not detected
YSP3	YOR003W	YBL111C	Q3E7Y5	667 aa		11.06	□□□□□ -0.64
YSP3	YOR003W	YPK1	P12688	680 aa	Known RBP	11.05	□□□□□ -0.64
YSP3	YOR003W	GFA1	P14742	717 aa	Known RBP	11.05	□□□□□ -0.64
YSP3	YOR003W	MET22	P32179	357 aa		11.05	□□□□□ -0.64
YSP3	YOR003W	SWE1	P32944	819 aa		11.05	□□□□□ -0.64
YSP3	YOR003W	LCP5	P40079	357 aa	Predicted RBP	11.05	□□□□□ -0.64
YSP3	YOR003W	UBP7	P40453	1071 aa		11.05	□□□□□ -0.64
YSP3	YOR003W	COP1	P53622	1201 aa	Known RBP	11.05	□□□□□ -0.64
YSP3	YOR003W	SND1	Q04007	877 aa		11.05	□□□□□ -0.64
YSP3	YOR003W	SIS1	P25294	352 aa	Known RBP	11.04	□□□□□ -0.64
YSP3	YOR003W	SEC6	P32844	805 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	SGE1	P33335	543 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	FSH1	P38777	243 aa	Known RBP	11.04	□□□□□ -0.64
YSP3	YOR003W	PMC1	P38929	1173 aa	Predicted RBP	11.04	□□□□□ -0.64
YSP3	YOR003W	PRM9	P39551	298 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	DOT6	P40059	670 aa	Known RBP	11.04	□□□□□ -0.64
YSP3	YOR003W	RTT101	P47050	842 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	YNR061C	P53747	219 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	YNL108C	P53929	270 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	NGL3	Q03210	505 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	RTN1	Q04947	295 aa	Known RBP	11.04	□□□□□ -0.64
YSP3	YOR003W	NSE1	Q07913	336 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	CIR2	Q08822	631 aa		11.04	□□□□□ -0.64
YSP3	YOR003W	COX6	P00427	148 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	CKI1	P20485	582 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	ADY2	P25613	283 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	MEI4	P29467	408 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	RCK2	P38623	610 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	ARP1	P38696	384 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	LAM1	P38851	1228 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	ERP2	P39704	215 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	EDC3	P39998	551 aa	Known RBP	11.03	□□□□□ -0.64
YSP3	YOR003W	MKT1	P40850	830 aa	Known RBP	11.03	□□□□□ -0.64
YSP3	YOR003W	EMW1	P42842	904 aa	Known RBP	11.03	□□□□□ -0.64
YSP3	YOR003W	GYP8	P43570	497 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	BST1	P43571	1029 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	RRT5	P43607	289 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	PRP24	P49960	444 aa	Known RBP	11.03	□□□□□ -0.64
YSP3	YOR003W	BOP3	P53958	396 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	YCS4	Q06156	1176 aa		11.03	□□□□□ -0.64
YSP3	YOR003W	HTA1	P04911	132 aa	Known RBP	11.02	□□□□□ -0.64
YSP3	YOR003W	HTA2	P04912	132 aa		11.02	□□□□□ -0.64
YSP3	YOR003W	FUS1	P11710	512 aa		11.02	□□□□□ -0.64
YSP3	YOR003W	YCR015C	P25616	317 aa		11.02	□□□□□ -0.64
YSP3	YOR003W	ALY2	P47029	1046 aa		11.02	□□□□□ -0.64
YSP3	YOR003W	TAN1	P53072	289 aa	Predicted RBP	11.02	□□□□□ -0.64
YSP3	YOR003W	ART5	P53244	586 aa	Known RBP	11.02	□□□□□ -0.64
YSP3	YOR003W	IMP4	P53941	290 aa	Known RBP	11.02	□□□□□ -0.64
YSP3	YOR003W	KAP95	Q06142	861 aa	Known RBP	11.02	□□□□□ -0.64
YSP3	YOR003W	SPO21	Q12411	609 aa		11.02	□□□□□ -0.64
YSP3	YOR003W	IZH4	Q99393	312 aa		11.02	□□□□□ -0.64
YSP3	YOR003W	HIS1	P00498	297 aa	Known RBP	11.01	□□□□□ -0.65
YSP3	YOR003W	RAD10	P06838	210 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	REV1	P12689	985 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	KIN3	P22209	435 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	PAP1	P29468	568 aa	Known RBP	11.01	□□□□□ -0.65
YSP3	YOR003W	AIM26	P32858	118 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	NEM1	P38757	446 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	FLC2	P39719	783 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	HEM14	P40012	539 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	ERG10	P41338	398 aa	Known RBP	11.01	□□□□□ -0.65
YSP3	YOR003W	RMD8	P43620	662 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	YPL014W	Q02606	381 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	YMR206W	Q03695	313 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	SML1	Q04964	104 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	ARF2	P19146	181 aa	Known RBP	11.01	□□□□□ -0.65
YSP3	YOR003W	SAK1	P38990	1142 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	SAW1	P39735	261 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	SNG1	P46950	547 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	YGR127W	P53275	312 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	YNL247W	P53852	767 aa	Known RBP	11.01	□□□□□ -0.65
YSP3	YOR003W	DOS2	P54858	310 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	THI7	Q05998	598 aa		11.01	□□□□□ -0.65
YSP3	YOR003W	NDD1	Q08887	554 aa		11.01	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 99.7 ms