RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeast

Gene SMD3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD3	YLR147C	HOP1	P20050	605 aa		4.78	□□□□□ -1.64
SMD3	YLR147C	PEA2	P40091	420 aa		4.78	□□□□□ -1.64
SMD3	YLR147C	RPS15	Q01855	142 aa	Known RBP	4.78	□□□□□ -1.64
SMD3	YLR147C	MTD1	Q02046	320 aa	Known RBP	4.78	□□□□□ -1.64
SMD3	YLR147C	ECM38	Q05902	660 aa	Predicted RBP	4.78	□□□□□ -1.64
SMD3	YLR147C	OSW1	Q08692	278 aa		4.78	□□□□□ -1.64
SMD3	YLR147C	CWC2	Q12046	339 aa	Predicted RBP	4.78	□□□□□ -1.64
SMD3	YLR147C	ULA1	Q12059	462 aa		4.78	□□□□□ -1.64
SMD3	YLR147C	TUF1	P02992	437 aa	Known RBP	4.77	□□□□□ -1.65
SMD3	YLR147C	ADE5,7	P07244	802 aa	Known RBP	4.77	□□□□□ -1.65
SMD3	YLR147C	PLC1	P32383	869 aa		4.77	□□□□□ -1.65
SMD3	YLR147C	DHR2	P36009	735 aa	Predicted RBP	4.77	□□□□□ -1.65
SMD3	YLR147C	PIH1	P38768	344 aa		4.77	□□□□□ -1.65
SMD3	YLR147C	BUD17	P53727	317 aa		4.77	□□□□□ -1.65
SMD3	YLR147C	SQS1	P53866	767 aa	Known RBP	4.77	□□□□□ -1.65
SMD3	YLR147C	THI7	Q05998	598 aa		4.77	□□□□□ -1.65
SMD3	YLR147C	MRI1	Q06489	411 aa	Known RBP	4.77	□□□□□ -1.65
SMD3	YLR147C	ZPS1	Q12512	249 aa		4.77	□□□□□ -1.65
SMD3	YLR147C	YNL162W-A	Q3E7A8	72 aa		4.77	□□□□□ -1.65
SMD3	YLR147C	VPS5	Q92331	675 aa		4.77	□□□□□ -1.65
SMD3	YLR147C	VPS33	P20795	691 aa		4.76	□□□□□ -1.65
SMD3	YLR147C	CWH43	P25618	953 aa		4.76	□□□□□ -1.65
SMD3	YLR147C	CAP1	P28495	268 aa	Known RBP	4.76	□□□□□ -1.65
SMD3	YLR147C	YJL193W	P39542	402 aa		4.76	□□□□□ -1.65
SMD3	YLR147C	EMP65	P40085	556 aa		4.76	□□□□□ -1.65
SMD3	YLR147C	MNT2	P53059	558 aa		4.76	□□□□□ -1.65
SMD3	YLR147C	YNL018C	P53976	612 aa		4.76	□□□□□ -1.65
SMD3	YLR147C	FMP30	Q02883	468 aa		4.76	□□□□□ -1.65
SMD3	YLR147C	SLK19	Q08581	821 aa	Known RBP	4.76	□□□□□ -1.65
SMD3	YLR147C	RTK1	Q12100	620 aa	Predicted RBP	4.76	□□□□□ -1.65
SMD3	YLR147C	PMA2	P19657	947 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	MRC1	P25588	1096 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	TFC4	P33339	1025 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	YPT10	P38146	199 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	FOL1	P53848	824 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	USA1	Q03714	838 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	YPL216W	Q08964	1102 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	DIN7	Q12086	430 aa		4.75	□□□□□ -1.65
SMD3	YLR147C	CPA2	P03965	1118 aa	Known RBP	4.74	□□□□□ -1.65
SMD3	YLR147C	SSB1	P11484	613 aa	Known RBP	4.74	□□□□□ -1.65
SMD3	YLR147C	AAD3	P25612	363 aa		4.74	□□□□□ -1.65
SMD3	YLR147C	RIM4	P38741	713 aa		4.74	□□□□□ -1.65
SMD3	YLR147C	SSB2	P40150	613 aa	Known RBP	4.74	□□□□□ -1.65
SMD3	YLR147C	MAD2	P40958	196 aa		4.74	□□□□□ -1.65
SMD3	YLR147C	COQ6	P53318	479 aa		4.74	□□□□□ -1.65
SMD3	YLR147C	YDL073W	Q07454	984 aa		4.74	□□□□□ -1.65
SMD3	YLR147C	PEX15	Q08215	383 aa		4.74	□□□□□ -1.65
SMD3	YLR147C	RPL7A	P05737	244 aa	Known RBP	4.73	□□□□□ -1.65
SMD3	YLR147C	PCK1	P10963	549 aa		4.73	□□□□□ -1.65
SMD3	YLR147C	HOM2	P13663	365 aa	Known RBP	4.73	□□□□□ -1.65
SMD3	YLR147C	ARG1	P22768	420 aa		4.73	□□□□□ -1.65
SMD3	YLR147C	CCL1	P37366	393 aa		4.73	□□□□□ -1.65
SMD3	YLR147C	STL1	P39932	569 aa		4.73	□□□□□ -1.65
SMD3	YLR147C	PEX14	P53112	341 aa		4.73	□□□□□ -1.65
SMD3	YLR147C	HOL1	P53389	586 aa		4.73	□□□□□ -1.65
SMD3	YLR147C	SLX4	Q12098	748 aa		4.73	□□□□□ -1.65
SMD3	YLR147C	RPL7B	Q12213	244 aa	Known RBP	4.73	□□□□□ -1.65
SMD3	YLR147C	URA3	P03962	267 aa		4.72	□□□□□ -1.65
SMD3	YLR147C	WHI2	P12611	486 aa		4.72	□□□□□ -1.65
SMD3	YLR147C	MDM10	P18409	493 aa		4.72	□□□□□ -1.65
SMD3	YLR147C	DSS4	P32601	143 aa		4.72	□□□□□ -1.65
SMD3	YLR147C	TAX4	P47030	604 aa		4.72	□□□□□ -1.65
SMD3	YLR147C	SAP4	P53036	818 aa		4.72	□□□□□ -1.65
SMD3	YLR147C	KAR1	P11927	433 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	ORC2	P32833	620 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	YIL092W	P40497	633 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	PIP2	P52960	996 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	YNR071C	P53757	342 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	PHM6	Q05637	104 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
SMD3	YLR147C	TGS1	Q12052	315 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	AI5_ALPHA	Q9ZZX1	630 aa		4.71	□□□□□ -1.66
SMD3	YLR147C	LOT5	P34234	306 aa		4.7	□□□□□ -1.66
SMD3	YLR147C	MDR1	P53258	950 aa		4.7	□□□□□ -1.66
SMD3	YLR147C	ERG11	P10614	530 aa		4.69	□□□□□ -1.66
SMD3	YLR147C	SEC12	P11655	471 aa		4.69	□□□□□ -1.66
SMD3	YLR147C	RNR3	P21672	869 aa	Known RBP	4.69	□□□□□ -1.66
SMD3	YLR147C	PET309	P32522	965 aa	Predicted RBP	4.69	□□□□□ -1.66
SMD3	YLR147C	SSP120	P39931	234 aa	Known RBP	4.69	□□□□□ -1.66
SMD3	YLR147C	YFL015C	P43578	164 aa		4.69	□□□□□ -1.66
SMD3	YLR147C	AQY1	P0CD91	305 aa		4.68	□□□□□ -1.66
SMD3	YLR147C	HOT13	P36078	116 aa		4.68	□□□□□ -1.66
SMD3	YLR147C	PUS4	P48567	403 aa	Known RBP	4.68	□□□□□ -1.66
SMD3	YLR147C	TGL2	P54857	326 aa		4.68	□□□□□ -1.66
SMD3	YLR147C	RIM13	Q03792	727 aa		4.68	□□□□□ -1.66
SMD3	YLR147C	HOF1	Q05080	669 aa		4.68	□□□□□ -1.66
SMD3	YLR147C	HOS1	Q12214	470 aa		4.68	□□□□□ -1.66
SMD3	YLR147C	PGK1	P00560	416 aa	Known RBP	4.67	□□□□□ -1.66
SMD3	YLR147C	AAC1	P04710	309 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	BET2	P20133	325 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	MBR1	P23493	339 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	CDC5	P32562	705 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	EXO1	P39875	702 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	COS12	P53053	380 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	YNL092W	P53934	400 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	SEG1	Q04279	960 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	PCL8	Q08966	492 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	PSF3	Q12146	194 aa		4.67	□□□□□ -1.66
SMD3	YLR147C	DBP10	Q12389	995 aa	Known RBP	4.67	□□□□□ -1.66
SMD3	YLR147C	YPK1	P12688	680 aa	Known RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms