RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C FMP30Q02883 468 aa3.48□□□□□ -1.85
AFB1YLR040C CEF1Q03654 590 aaPredicted RBP3.48□□□□□ -1.85
AFB1YLR040C MRI1Q06489 411 aaKnown RBP3.48□□□□□ -1.85
AFB1YLR040C SLK19Q08581 821 aaKnown RBP3.48□□□□□ -1.85
AFB1YLR040C TRE2Q08693 809 aa3.48□□□□□ -1.85
AFB1YLR040C CWC2Q12046 339 aaPredicted RBP3.48□□□□□ -1.85
AFB1YLR040C ULA1Q12059 462 aa3.48□□□□□ -1.85
AFB1YLR040C YNL162W-AQ3E7A8 72 aa3.48□□□□□ -1.85
AFB1YLR040C LEU2P04173 364 aaPredicted RBP3.47□□□□□ -1.85
AFB1YLR040C AAD3P25612 363 aa3.47□□□□□ -1.85
AFB1YLR040C YPT10P38146 199 aa3.47□□□□□ -1.85
AFB1YLR040C PIH1P38768 344 aa3.47□□□□□ -1.85
AFB1YLR040C PEA2P40091 420 aa3.47□□□□□ -1.85
AFB1YLR040C SLD3P53135 668 aa3.47□□□□□ -1.85
AFB1YLR040C SQS1P53866 767 aaKnown RBP3.47□□□□□ -1.85
AFB1YLR040C YNL018CP53976 612 aa3.47□□□□□ -1.85
AFB1YLR040C ZPS1Q12512 249 aa3.47□□□□□ -1.85
AFB1YLR040C HOM2P13663 365 aaKnown RBP3.46□□□□□ -1.86
AFB1YLR040C HOP1P20050 605 aa3.46□□□□□ -1.86
AFB1YLR040C PLC1P32383 869 aa3.46□□□□□ -1.86
AFB1YLR040C TFC4P33339 1025 aa3.46□□□□□ -1.86
AFB1YLR040C YJL193WP39542 402 aa3.46□□□□□ -1.86
AFB1YLR040C TAX4P47030 604 aa3.46□□□□□ -1.86
AFB1YLR040C BUD17P53727 317 aa3.46□□□□□ -1.86
AFB1YLR040C FOL1P53848 824 aa3.46□□□□□ -1.86
AFB1YLR040C RPS15Q01855 142 aaKnown RBP3.46□□□□□ -1.86
AFB1YLR040C RTK1Q12100 620 aaPredicted RBP3.46□□□□□ -1.86
AFB1YLR040C CPA2P03965 1118 aaKnown RBP3.45□□□□□ -1.86
AFB1YLR040C PCK1P10963 549 aa3.45□□□□□ -1.86
AFB1YLR040C PMA2P19657 947 aa3.45□□□□□ -1.86
AFB1YLR040C VPS33P20795 691 aa3.45□□□□□ -1.86
AFB1YLR040C CAP1P28495 268 aaKnown RBP3.45□□□□□ -1.86
AFB1YLR040C DHR2P36009 735 aaPredicted RBP3.45□□□□□ -1.86
AFB1YLR040C MNT2P53059 558 aa3.45□□□□□ -1.86
AFB1YLR040C COQ6P53318 479 aa3.45□□□□□ -1.86
AFB1YLR040C MTD1Q02046 320 aaKnown RBP3.45□□□□□ -1.86
AFB1YLR040C USA1Q03714 838 aa3.45□□□□□ -1.86
AFB1YLR040C YPL216WQ08964 1102 aa3.45□□□□□ -1.86
AFB1YLR040C DIN7Q12086 430 aa3.45□□□□□ -1.86
AFB1YLR040C TUF1P02992 437 aaKnown RBP3.44□□□□□ -1.86
AFB1YLR040C ARG1P22768 420 aa3.44□□□□□ -1.86
AFB1YLR040C CWH43P25618 953 aa3.44□□□□□ -1.86
AFB1YLR040C PAF1P38351 445 aa3.44□□□□□ -1.86
AFB1YLR040C RIM4P38741 713 aa3.44□□□□□ -1.86
AFB1YLR040C MAD2P40958 196 aa3.44□□□□□ -1.86
AFB1YLR040C PIP2P52960 996 aa3.44□□□□□ -1.86
AFB1YLR040C YDL073WQ07454 984 aa3.44□□□□□ -1.86
AFB1YLR040C AI5_ALPHAQ9ZZX1 630 aa3.44□□□□□ -1.86
AFB1YLR040C ERG11P10614 530 aa3.43□□□□□ -1.86
AFB1YLR040C WHI2P12611 486 aa3.43□□□□□ -1.86
AFB1YLR040C ORC2P32833 620 aa3.43□□□□□ -1.86
AFB1YLR040C CCL1P37366 393 aa3.43□□□□□ -1.86
AFB1YLR040C EMP65P40085 556 aa3.43□□□□□ -1.86
AFB1YLR040C SAP4P53036 818 aa3.43□□□□□ -1.86
AFB1YLR040C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
AFB1YLR040C VPS5Q92331 675 aa3.43□□□□□ -1.86
AFB1YLR040C URA3P03962 267 aa3.42□□□□□ -1.86
AFB1YLR040C RPL7AP05737 244 aaKnown RBP3.42□□□□□ -1.86
AFB1YLR040C AQY1P0CD91 305 aa3.42□□□□□ -1.86
AFB1YLR040C YPK1P12688 680 aaKnown RBP3.42□□□□□ -1.86
AFB1YLR040C RNR3P21672 869 aaKnown RBP3.42□□□□□ -1.86
AFB1YLR040C DSS4P32601 143 aa3.42□□□□□ -1.86
AFB1YLR040C EXO1P39875 702 aa3.42□□□□□ -1.86
AFB1YLR040C STL1P39932 569 aa3.42□□□□□ -1.86
AFB1YLR040C YIL092WP40497 633 aa3.42□□□□□ -1.86
AFB1YLR040C YFL015CP43578 164 aa3.42□□□□□ -1.86
AFB1YLR040C PEX14P53112 341 aa3.42□□□□□ -1.86
AFB1YLR040C MDR1P53258 950 aa3.42□□□□□ -1.86
AFB1YLR040C YNR071CP53757 342 aa3.42□□□□□ -1.86
AFB1YLR040C PEX15Q08215 383 aa3.42□□□□□ -1.86
AFB1YLR040C TGS1Q12052 315 aa3.42□□□□□ -1.86
AFB1YLR040C SLX4Q12098 748 aa3.42□□□□□ -1.86
AFB1YLR040C RPL7BQ12213 244 aaKnown RBP3.42□□□□□ -1.86
AFB1YLR040C SSB1P11484 613 aaKnown RBP3.41□□□□□ -1.86
AFB1YLR040C KAR1P11927 433 aa3.41□□□□□ -1.86
AFB1YLR040C NUP1P20676 1076 aa3.41□□□□□ -1.86
AFB1YLR040C SSB2P40150 613 aaKnown RBP3.41□□□□□ -1.86
AFB1YLR040C COS12P53053 380 aa3.41□□□□□ -1.86
AFB1YLR040C HOL1P53389 586 aa3.41□□□□□ -1.86
AFB1YLR040C RIM13Q03792 727 aa3.41□□□□□ -1.86
AFB1YLR040C HOF1Q05080 669 aa3.41□□□□□ -1.86
AFB1YLR040C PHM6Q05637 104 aa3.41□□□□□ -1.86
AFB1YLR040C SEC3P33332 1336 aaKnown RBP3.41□□□□□ -1.86
AFB1YLR040C SEC12P11655 471 aa3.4□□□□□ -1.87
AFB1YLR040C BET2P20133 325 aa3.4□□□□□ -1.87
AFB1YLR040C APN1P22936 367 aa3.4□□□□□ -1.87
AFB1YLR040C MRC1P25588 1096 aa3.4□□□□□ -1.87
AFB1YLR040C HOT13P36078 116 aa3.4□□□□□ -1.87
AFB1YLR040C STB5P38699 743 aa3.4□□□□□ -1.87
AFB1YLR040C HOS1Q12214 470 aa3.4□□□□□ -1.87
AFB1YLR040C PGK1P00560 416 aaKnown RBP3.39□□□□□ -1.87
AFB1YLR040C MBR1P23493 339 aa3.39□□□□□ -1.87
AFB1YLR040C MRPL9P31334 269 aa3.39□□□□□ -1.87
AFB1YLR040C PET309P32522 965 aaPredicted RBP3.39□□□□□ -1.87
AFB1YLR040C LOT5P34234 306 aa3.39□□□□□ -1.87
AFB1YLR040C YNL092WP53934 400 aa3.39□□□□□ -1.87
AFB1YLR040C TGL2P54857 326 aa3.39□□□□□ -1.87
AFB1YLR040C WAR1Q03631 944 aa3.39□□□□□ -1.87
AFB1YLR040C SEG1Q04279 960 aa3.39□□□□□ -1.87
AFB1YLR040C PCL8Q08966 492 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms