RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W BNR1P40450 1375 aa3.98□□□□□ -1.77
LOC1YFR001W VPS33P20795 691 aa3.97□□□□□ -1.77
LOC1YFR001W CNE1P27825 502 aa3.97□□□□□ -1.77
LOC1YFR001W PMC1P38929 1173 aaPredicted RBP3.97□□□□□ -1.77
LOC1YFR001W YJL193WP39542 402 aa3.97□□□□□ -1.77
LOC1YFR001W PAC2P39937 518 aa3.97□□□□□ -1.77
LOC1YFR001W ASN1P49089 572 aaKnown RBP3.97□□□□□ -1.77
LOC1YFR001W MRK1P50873 501 aa3.97□□□□□ -1.77
LOC1YFR001W YIP4P53093 235 aa3.97□□□□□ -1.77
LOC1YFR001W TRS23Q03784 219 aa3.97□□□□□ -1.77
LOC1YFR001W RTK1Q12100 620 aaPredicted RBP3.97□□□□□ -1.77
LOC1YFR001W TPK2P06245 380 aa3.96□□□□□ -1.78
LOC1YFR001W HOP1P20050 605 aa3.96□□□□□ -1.78
LOC1YFR001W SAT4P25333 603 aaKnown RBP3.96□□□□□ -1.78
LOC1YFR001W CAP1P28495 268 aaKnown RBP3.96□□□□□ -1.78
LOC1YFR001W FLO10P36170 1169 aa3.96□□□□□ -1.78
LOC1YFR001W YIL092WP40497 633 aa3.96□□□□□ -1.78
LOC1YFR001W MAD2P40958 196 aa3.96□□□□□ -1.78
LOC1YFR001W YNL034WP53963 612 aa3.96□□□□□ -1.78
LOC1YFR001W YNL018CP53976 612 aa3.96□□□□□ -1.78
LOC1YFR001W TGL2P54857 326 aa3.96□□□□□ -1.78
LOC1YFR001W DIN7Q12086 430 aa3.96□□□□□ -1.78
LOC1YFR001W RPA135P22138 1203 aaKnown RBP3.95□□□□□ -1.78
LOC1YFR001W CUE2P36075 443 aaKnown RBP3.95□□□□□ -1.78
LOC1YFR001W PIH1P38768 344 aa3.95□□□□□ -1.78
LOC1YFR001W SSP120P39931 234 aaKnown RBP3.95□□□□□ -1.78
LOC1YFR001W YGL117WP53133 265 aa3.95□□□□□ -1.78
LOC1YFR001W PEX8P53248 589 aa3.95□□□□□ -1.78
LOC1YFR001W MDR1P53258 950 aa3.95□□□□□ -1.78
LOC1YFR001W BUD17P53727 317 aa3.95□□□□□ -1.78
LOC1YFR001W CPR8P53728 308 aa3.95□□□□□ -1.78
LOC1YFR001W RPS15Q01855 142 aaKnown RBP3.95□□□□□ -1.78
LOC1YFR001W YPL216WQ08964 1102 aa3.95□□□□□ -1.78
LOC1YFR001W URA3P03962 267 aa3.94□□□□□ -1.78
LOC1YFR001W PCK1P10963 549 aa3.94□□□□□ -1.78
LOC1YFR001W ARG1P22768 420 aa3.94□□□□□ -1.78
LOC1YFR001W YMC1P32331 307 aa3.94□□□□□ -1.78
LOC1YFR001W UGP1P32861 499 aaKnown RBP3.94□□□□□ -1.78
LOC1YFR001W YNR071CP53757 342 aa3.94□□□□□ -1.78
LOC1YFR001W USA1Q03714 838 aa3.94□□□□□ -1.78
LOC1YFR001W SND1Q04007 877 aa3.94□□□□□ -1.78
LOC1YFR001W PSF3Q12146 194 aa3.94□□□□□ -1.78
LOC1YFR001W HOS1Q12214 470 aa3.94□□□□□ -1.78
LOC1YFR001W ZPS1Q12512 249 aa3.94□□□□□ -1.78
LOC1YFR001W TMA7Q3E764 64 aaKnown RBP3.94□□□□□ -1.78
LOC1YFR001W SEC12P11655 471 aa3.93□□□□□ -1.78
LOC1YFR001W PET309P32522 965 aaPredicted RBP3.93□□□□□ -1.78
LOC1YFR001W DSS4P32601 143 aa3.93□□□□□ -1.78
LOC1YFR001W PEX2P32800 271 aa3.93□□□□□ -1.78
LOC1YFR001W CCL1P37366 393 aa3.93□□□□□ -1.78
LOC1YFR001W RIM4P38741 713 aa3.93□□□□□ -1.78
LOC1YFR001W CNM67P53865 581 aaKnown RBP3.93□□□□□ -1.78
LOC1YFR001W ARG7Q04728 441 aa3.93□□□□□ -1.78
LOC1YFR001W YDL073WQ07454 984 aa3.93□□□□□ -1.78
LOC1YFR001W NDJ1Q12366 352 aa3.93□□□□□ -1.78
LOC1YFR001W ADE5,7P07244 802 aaKnown RBP3.92□□□□□ -1.78
LOC1YFR001W PHO3P24031 467 aa3.92□□□□□ -1.78
LOC1YFR001W TGL1P34163 548 aa3.92□□□□□ -1.78
LOC1YFR001W YPT10P38146 199 aa3.92□□□□□ -1.78
LOC1YFR001W SCS2P40075 244 aaKnown RBP3.92□□□□□ -1.78
LOC1YFR001W PUS4P48567 403 aaKnown RBP3.92□□□□□ -1.78
LOC1YFR001W COQ6P53318 479 aa3.92□□□□□ -1.78
LOC1YFR001W LGE1Q02796 332 aaKnown RBP3.92□□□□□ -1.78
LOC1YFR001W TGS1Q12052 315 aa3.92□□□□□ -1.78
LOC1YFR001W ULA1Q12059 462 aa3.92□□□□□ -1.78
LOC1YFR001W NUR1Q12066 484 aa3.92□□□□□ -1.78
LOC1YFR001W DBP10Q12389 995 aaKnown RBP3.92□□□□□ -1.78
LOC1YFR001W MPD2Q99316 277 aa3.92□□□□□ -1.78
LOC1YFR001W CPA2P03965 1118 aaKnown RBP3.91□□□□□ -1.78
LOC1YFR001W LEU2P04173 364 aaPredicted RBP3.91□□□□□ -1.78
LOC1YFR001W WHI2P12611 486 aa3.91□□□□□ -1.78
LOC1YFR001W VPS34P22543 875 aa3.91□□□□□ -1.78
LOC1YFR001W LOT5P34234 306 aa3.91□□□□□ -1.78
LOC1YFR001W GRX7P38068 203 aa3.91□□□□□ -1.78
LOC1YFR001W GSM1P42950 618 aa3.91□□□□□ -1.78
LOC1YFR001W SAP4P53036 818 aa3.91□□□□□ -1.78
LOC1YFR001W IMO32P53219 342 aa3.91□□□□□ -1.78
LOC1YFR001W TRI1Q05024 226 aa3.91□□□□□ -1.78
LOC1YFR001W SLK19Q08581 821 aaKnown RBP3.91□□□□□ -1.78
LOC1YFR001W VAS1P07806 1104 aaKnown RBP3.9□□□□□ -1.79
LOC1YFR001W PMA2P19657 947 aa3.9□□□□□ -1.79
LOC1YFR001W BET2P20133 325 aa3.9□□□□□ -1.79
LOC1YFR001W NIC96P34077 839 aa3.9□□□□□ -1.79
LOC1YFR001W SDS22P36047 338 aa3.9□□□□□ -1.79
LOC1YFR001W SAW1P39735 261 aa3.9□□□□□ -1.79
LOC1YFR001W ASK10P48361 1146 aa3.9□□□□□ -1.79
LOC1YFR001W COS12P53053 380 aa3.9□□□□□ -1.79
LOC1YFR001W CEG1Q01159 459 aaPredicted RBP3.9□□□□□ -1.79
LOC1YFR001W FMP30Q02883 468 aa3.9□□□□□ -1.79
LOC1YFR001W HOF1Q05080 669 aa3.9□□□□□ -1.79
LOC1YFR001W RPL7AP05737 244 aaKnown RBP3.89□□□□□ -1.79
LOC1YFR001W ADH4P10127 382 aa3.89□□□□□ -1.79
LOC1YFR001W CBP3P21560 335 aa3.89□□□□□ -1.79
LOC1YFR001W AAD3P25612 363 aa3.89□□□□□ -1.79
LOC1YFR001W COQ11Q05892 277 aa3.89□□□□□ -1.79
LOC1YFR001W OSW1Q08692 278 aa3.89□□□□□ -1.79
LOC1YFR001W RPL7BQ12213 244 aaKnown RBP3.89□□□□□ -1.79
LOC1YFR001W AAC1P04710 309 aa3.88□□□□□ -1.79
LOC1YFR001W SST2P11972 698 aaKnown RBP3.88□□□□□ -1.79
LOC1YFR001W RNR3P21672 869 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms