RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ZDHHC15Q96MV8 337 aa20.93■□□□□ 0.94
PHGDH-230ENST00000641927 MRIQ9BWK5 157 aa20.93■□□□□ 0.94
PHGDH-230ENST00000641927 LSG1Q9H089 658 aaKnown RBP20.93■□□□□ 0.94
PHGDH-230ENST00000641927 PCDHAC2Q9Y5I4 1007 aa20.93■□□□□ 0.94
PHGDH-230ENST00000641927 ADAMTSL1Q8N6G6 1762 aa20.93■□□□□ 0.94
PHGDH-230ENST00000641927 PRKAB2O43741 272 aa20.92■□□□□ 0.94
PHGDH-230ENST00000641927 HSPD1P10809 573 aaKnown RBP20.92■□□□□ 0.94
PHGDH-230ENST00000641927 GNAT2P19087 354 aa20.92■□□□□ 0.94
PHGDH-230ENST00000641927 MICALL2Q8IY33 904 aa20.92■□□□□ 0.94
PHGDH-230ENST00000641927 SH3RF3Q8TEJ3 882 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-230ENST00000641927 DPF2Q92785 391 aa20.92■□□□□ 0.94
PHGDH-230ENST00000641927 CRNKL1Q9BZJ0 848 aaKnown RBP20.92■□□□□ 0.94
PHGDH-230ENST00000641927 SHTN1A0MZ66 631 aa20.91■□□□□ 0.94
PHGDH-230ENST00000641927 PLCG2P16885 1265 aa20.91■□□□□ 0.94
PHGDH-230ENST00000641927 PPP4CP60510 307 aa20.91■□□□□ 0.94
PHGDH-230ENST00000641927 DLGAP5Q15398 846 aa20.91■□□□□ 0.94
PHGDH-230ENST00000641927 CERS3Q8IU89 383 aa20.91■□□□□ 0.94
PHGDH-230ENST00000641927 CNOT7Q9UIV1 285 aaKnown RBP20.91■□□□□ 0.94
PHGDH-230ENST00000641927 APOBEC3HQ6NTF7 200 aaKnown RBP20.9■□□□□ 0.94
PHGDH-230ENST00000641927 SDR42E1Q8WUS8 393 aa20.9■□□□□ 0.94
PHGDH-230ENST00000641927 USP26Q9BXU7 913 aa20.9■□□□□ 0.94
PHGDH-230ENST00000641927 ZC3H4Q9UPT8 1303 aaKnown RBP20.9■□□□□ 0.94
PHGDH-230ENST00000641927 PATL2C9JE40 543 aaKnown RBP20.89■□□□□ 0.94
PHGDH-230ENST00000641927 RBM26Q5T8P6 1007 aaKnown RBP20.89■□□□□ 0.94
PHGDH-230ENST00000641927 TEX11Q8IYF3 940 aa20.89■□□□□ 0.94
PHGDH-230ENST00000641927 DSCC1Q9BVC3 393 aa20.89■□□□□ 0.94
PHGDH-230ENST00000641927 MYOZ2Q9NPC6 264 aa20.89■□□□□ 0.94
PHGDH-230ENST00000641927 USP40Q9NVE5 1235 aa20.89■□□□□ 0.94
PHGDH-230ENST00000641927 H7C1D1 291 aa20.89■□□□□ 0.93
PHGDH-230ENST00000641927 USP5P45974 858 aa20.89■□□□□ 0.93
PHGDH-230ENST00000641927 MAP4K1Q92918 833 aa20.89■□□□□ 0.93
PHGDH-230ENST00000641927 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
PHGDH-230ENST00000641927 LMOD1P29536 600 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-230ENST00000641927 MMP14P50281 582 aa20.88■□□□□ 0.93
PHGDH-230ENST00000641927 ZNF280AP59817 542 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-230ENST00000641927 CDC42EP5Q6NZY7 148 aa20.88■□□□□ 0.93
PHGDH-230ENST00000641927 TGFBRAP1Q8WUH2 860 aa20.88■□□□□ 0.93
PHGDH-230ENST00000641927 DDRGK1Q96HY6 314 aa20.88■□□□□ 0.93
PHGDH-230ENST00000641927 PRMT6Q96LA8 375 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-230ENST00000641927 GPRC5DQ9NZD1 345 aa20.88■□□□□ 0.93
PHGDH-230ENST00000641927 RBM8AQ9Y5S9 174 aaKnown RBP20.88■□□□□ 0.93
PHGDH-230ENST00000641927 SPDYE2BA6NHP3 402 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 GSG1L2A8MUP6 293 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 FOXP2O15409 715 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 SPDYE6P0CI01 402 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 MCCP23508 829 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 TDO2P48775 406 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 RHBDL3P58872 404 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 C22orf23Q9BZE7 217 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 NAPBQ9H115 298 aa20.87■□□□□ 0.93
PHGDH-230ENST00000641927 TDRD3Q9H7E2 651 aaKnown RBP20.87■□□□□ 0.93
PHGDH-230ENST00000641927 U3KPZ7 1027 aaPredicted RBP20.87■□□□□ 0.93
PHGDH-230ENST00000641927 TBC1D10BQ4KMP7 808 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-230ENST00000641927 SAMD7Q7Z3H4 446 aa20.86■□□□□ 0.93
PHGDH-230ENST00000641927 IFNL3Q8IZI9 196 aa20.86■□□□□ 0.93
PHGDH-230ENST00000641927 EPB41L2O43491 1005 aaKnown RBP20.86■□□□□ 0.93
PHGDH-230ENST00000641927 MYO1BO43795 1136 aa20.86■□□□□ 0.93
PHGDH-230ENST00000641927 FGAP02671 866 aa20.86■□□□□ 0.93
PHGDH-230ENST00000641927 PICALMQ13492 652 aa20.86■□□□□ 0.93
PHGDH-230ENST00000641927 EPB41L4AQ9HCS5 686 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-230ENST00000641927 CTNNA3Q9UI47 895 aa20.86■□□□□ 0.93
PHGDH-230ENST00000641927 GLTPD2A6NH11 291 aa20.85■□□□□ 0.93
PHGDH-230ENST00000641927 EPS15P42566 896 aa20.85■□□□□ 0.93
PHGDH-230ENST00000641927 CACNB3P54284 484 aa20.85■□□□□ 0.93
PHGDH-230ENST00000641927 KIF4BQ2VIQ3 1234 aa20.85■□□□□ 0.93
PHGDH-230ENST00000641927 MAPKAPK5Q8IW41 473 aa20.85■□□□□ 0.93
PHGDH-230ENST00000641927 MTMR14Q8NCE2 650 aa20.85■□□□□ 0.93
PHGDH-230ENST00000641927 ATP8A2Q9NTI2 1148 aa20.85■□□□□ 0.93
PHGDH-230ENST00000641927 RPAP1Q9BWH6 1393 aaPredicted RBP20.84■□□□□ 0.93
PHGDH-230ENST00000641927 CLRN2A0PK11 232 aa20.84■□□□□ 0.93
PHGDH-230ENST00000641927 WNT10BO00744 389 aa20.84■□□□□ 0.93
PHGDH-230ENST00000641927 EGFRP00533 1210 aa20.84■□□□□ 0.93
PHGDH-230ENST00000641927 DCP1AQ9NPI6 582 aaPredicted RBP20.84■□□□□ 0.93
PHGDH-230ENST00000641927 TMOD2Q9NZR1 351 aa20.84■□□□□ 0.93
PHGDH-230ENST00000641927 NBPF9Q3BBW0 867 aa20.83■□□□□ 0.93
PHGDH-230ENST00000641927 MCM9Q9NXL9 1143 aa20.83■□□□□ 0.93
PHGDH-230ENST00000641927 WDHD1O75717 1129 aaPredicted RBP20.83■□□□□ 0.92
PHGDH-230ENST00000641927 HSPA4P34932 840 aa20.83■□□□□ 0.92
PHGDH-230ENST00000641927 NECTIN1Q15223 517 aa20.83■□□□□ 0.92
PHGDH-230ENST00000641927 RNF20Q5VTR2 975 aa20.83■□□□□ 0.92
PHGDH-230ENST00000641927 CREB3L3Q68CJ9 461 aa20.83■□□□□ 0.92
PHGDH-230ENST00000641927 VEZTQ9HBM0 779 aa20.83■□□□□ 0.92
PHGDH-230ENST00000641927 FLT1P17948 1338 aa20.82■□□□□ 0.92
PHGDH-230ENST00000641927 HAND2P61296 217 aa20.82■□□□□ 0.92
PHGDH-230ENST00000641927 ALX1Q15699 326 aa20.82■□□□□ 0.92
PHGDH-230ENST00000641927 IMMTQ16891 758 aaKnown RBP20.82■□□□□ 0.92
PHGDH-230ENST00000641927 SLC4A8Q2Y0W8 1093 aa20.82■□□□□ 0.92
PHGDH-230ENST00000641927 GIMAP6Q6P9H5 292 aa20.82■□□□□ 0.92
PHGDH-230ENST00000641927 TBC1D32Q96NH3 1257 aa20.82■□□□□ 0.92
PHGDH-230ENST00000641927 ZNF70Q9UC06 446 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-230ENST00000641927 SAP30BPQ9UHR5 308 aaKnown RBP20.82■□□□□ 0.92
PHGDH-230ENST00000641927 MINDY4BA8MYZ0 360 aa20.81■□□□□ 0.92
PHGDH-230ENST00000641927 ZNF213O14771 459 aa20.81■□□□□ 0.92
PHGDH-230ENST00000641927 SLC27A2O14975 620 aa20.81■□□□□ 0.92
PHGDH-230ENST00000641927 TCP10Q12799 353 aa20.81■□□□□ 0.92
PHGDH-230ENST00000641927 NFIAQ12857 509 aa20.81■□□□□ 0.92
PHGDH-230ENST00000641927 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
PHGDH-230ENST00000641927 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
PHGDH-230ENST00000641927 ZBED3Q96IU2 234 aaPredicted RBP20.81■□□□□ 0.92
PHGDH-230ENST00000641927 L3MBTL3Q96JM7 780 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms