RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PPP2R3BQ9Y5P8 575 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 NR2E3Q9Y5X4 410 aa11.51□□□□□ -0.57
PHGDH-228ENST00000641847 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
PHGDH-228ENST00000641847 MYO1BO43795 1136 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-228ENST00000641847 CHRNDQ07001 517 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 MAP3K11Q16584 847 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 DACT2Q5SW24 774 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 AACSQ86V21 672 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 ZFYVE28Q9HCC9 887 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 FPGT-TNNI3KV9GXZ4 949 aa11.5□□□□□ -0.57
PHGDH-228ENST00000641847 COL1A1P02452 1464 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-228ENST00000641847 IFIT2P09913 472 aaKnown RBP11.49□□□□□ -0.57
PHGDH-228ENST00000641847 RGS3P49796 1198 aa11.49□□□□□ -0.57
PHGDH-228ENST00000641847 PUM3Q15397 648 aaKnown RBP11.49□□□□□ -0.57
PHGDH-228ENST00000641847 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-228ENST00000641847 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-228ENST00000641847 EAF2Q96CJ1 260 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-228ENST00000641847 ANKRD2Q9GZV1 360 aa11.49□□□□□ -0.57
PHGDH-228ENST00000641847 GPR108Q9NPR9 543 aa11.49□□□□□ -0.57
PHGDH-228ENST00000641847 MINPP1Q9UNW1 487 aa11.49□□□□□ -0.57
PHGDH-228ENST00000641847 PTCH2Q9Y6C5 1203 aa11.49□□□□□ -0.57
PHGDH-228ENST00000641847 A0A1B0GUL7 405 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 A0A1W2PPC1 479 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 TAF5LO75529 589 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 PDE8BO95263 885 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 GNRH1P01148 92 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 DLGAP5Q15398 846 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 ATP2B3Q16720 1220 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 TTLL5Q6EMB2 1281 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 ANKRD13AQ8IZ07 590 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 COA1Q9GZY4 146 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
PHGDH-228ENST00000641847 AKAP2Q9Y2D5 859 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 SALL3Q9BXA9 1300 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 SCN9AQ15858 1988 aa11.48□□□□□ -0.57
PHGDH-228ENST00000641847 MED23Q9ULK4 1368 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 SLC5A1P13866 664 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 MX1P20591 662 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 FGFR2P21802 821 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 KCNJ4P48050 445 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 PRMT2P55345 433 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-228ENST00000641847 KIAA0825Q8IV33 1275 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 LPIN2Q92539 896 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 NEUROD6Q96NK8 337 aa11.47□□□□□ -0.57
PHGDH-228ENST00000641847 CCDC8Q9H0W5 538 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-228ENST00000641847 DBNLQ9UJU6 430 aaKnown RBP11.47□□□□□ -0.57
PHGDH-228ENST00000641847 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-228ENST00000641847 ADORA1P30542 326 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 PLEKHM2Q8IWE5 1019 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 SH3TC2Q8TF17 1288 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 GPATCH3Q96I76 525 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 DBNDD2Q9BQY9 259 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 MXD3Q9BW11 206 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 FZD1Q9UP38 647 aa11.46□□□□□ -0.57
PHGDH-228ENST00000641847 ZNF804BA4D1E1 1349 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 AOX1Q06278 1338 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 WTIPA6NIX2 430 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-228ENST00000641847 SNAP23O00161 211 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 IFIT1P09914 478 aaKnown RBP11.45□□□□□ -0.58
PHGDH-228ENST00000641847 GTF2A2P52657 109 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 TIMM10P62072 90 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 OPTNQ96CV9 577 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 XAGE2Q96GT9 111 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 PTPN18Q99952 460 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
PHGDH-228ENST00000641847 TTC41PQ6P2S7 1318 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 KLRK1P26718 216 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 HOXD10P28358 340 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 PDE1AP54750 535 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 UBE4AQ14139 1066 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 GORABQ5T7V8 394 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 VEZTQ9HBM0 779 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 STAP2Q9UGK3 403 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 LEMD3Q9Y2U8 911 aa11.44□□□□□ -0.58
PHGDH-228ENST00000641847 CCL15-CCL14A0A0B4J2E2 113 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 GTF2IP78347 998 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 TNFAIP1Q13829 316 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 CCL15Q16663 113 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 OSBPL3Q9H4L5 887 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 ELP3Q9H9T3 547 aa11.43□□□□□ -0.58
PHGDH-228ENST00000641847 IRS2Q9Y4H2 1338 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 VCANP13611 3396 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 ERC2O15083 957 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 EVI5O60447 810 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 USP2O75604 605 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-228ENST00000641847 LACTBP83111 547 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-228ENST00000641847 CCDC158Q5M9N0 1113 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 TTC22Q5TAA0 569 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 CCDC102BQ68D86 513 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 MTMR14Q8NCE2 650 aa11.42□□□□□ -0.58
PHGDH-228ENST00000641847 RAET1EQ8TD07 263 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms