RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PRPF38AQ8NAV1 312 aaKnown RBP13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 GREM2Q9H772 168 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 LIMCH1Q9UPQ0 1083 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 SGSM2O43147 1006 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 PLA2G4AP47712 749 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 ATP2B2Q01814 1243 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 TICAM2Q86XR7 235 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 GOLIM4O00461 696 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 CSF1RP07333 972 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 SUSD4Q5VX71 490 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 TTC6Q86TZ1 520 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 FAM227BQ96M60 508 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 ADAM21Q9UKJ8 722 aa13.66□□□□□ -0.22
RBFOX1-224ENST00000641259 SBF2Q86WG5 1849 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 DDX60Q8IY21 1712 aaKnown RBP13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 CFAP100Q494V2 611 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 FOXR1Q6PIV2 292 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 UTP14AQ9BVJ6 771 aaKnown RBP13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 ZNF609O15014 1411 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 TULP2O00295 520 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 NR1I2O75469 434 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 FKBP15Q5T1M5 1219 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 SRLQ86TD4 932 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 PDE11AQ9HCR9 933 aa13.65□□□□□ -0.22
RBFOX1-224ENST00000641259 JAKMIP3Q5VZ66 844 aa13.65□□□□□ -0.23
RBFOX1-224ENST00000641259 TTLL11Q8NHH1 800 aa13.65□□□□□ -0.23
RBFOX1-224ENST00000641259 GPATCH3Q96I76 525 aa13.65□□□□□ -0.23
RBFOX1-224ENST00000641259 IFNKQ9P0W0 207 aa13.65□□□□□ -0.23
RBFOX1-224ENST00000641259 TRMT112Q9UI30 125 aaKnown RBP13.65□□□□□ -0.23
RBFOX1-224ENST00000641259 EYA2O00167 538 aa13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 LSG1Q9H089 658 aaKnown RBP13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 RIC1Q4ADV7 1423 aa13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 EIF3CLB5ME19 914 aaKnown RBP13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 CEP57Q86XR8 500 aa13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 EIF3CQ99613 913 aaKnown RBP13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 FAM107BQ9H098 131 aa13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 ATRNO75882 1429 aa13.64□□□□□ -0.23
RBFOX1-224ENST00000641259 NEBLO76041 1014 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 ZKSCAN1P17029 563 aaPredicted RBP13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 CTSWP56202 376 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 PTH1RQ03431 593 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 SLFNL1Q499Z3 407 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 CEP57L1Q8IYX8 460 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 GEMIN8Q9NWZ8 242 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 AKAP17AQ02040 695 aaKnown RBP13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 EVI5LQ96CN4 794 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 A0A0D9SFI3 127 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 CCDC57Q2TAC2 916 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 PACS2Q86VP3 889 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 PLCD4Q9BRC7 762 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
RBFOX1-224ENST00000641259 ITGA6P23229 1130 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 RPAINQ86UA6 219 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 NOC3LQ8WTT2 800 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 CCDC12Q8WUD4 166 aaPredicted RBP13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 CPLX3Q8WVH0 158 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 CXorf56Q9H5V9 222 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 CASZ1Q86V15 1759 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 ATP5JP18859 108 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 NMIQ13287 307 aaPredicted RBP13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 GOLGA5Q8TBA6 731 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 NEUROD6Q96NK8 337 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 CYP46A1Q9Y6A2 500 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 IVLP07476 585 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 ADORA1P30542 326 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 IL15P40933 162 aaPredicted RBP13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 SLC20A2Q08357 652 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 TTC19Q6DKK2 380 aaPredicted RBP13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 SUFUQ9UMX1 484 aa13.62□□□□□ -0.23
RBFOX1-224ENST00000641259 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 ATP2C2O75185 946 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 CIAO1O76071 339 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 LARGE1O95461 756 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 ACTN2P35609 894 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 PPP2R3AQ06190 1150 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 COL9A3Q14050 684 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 PPM1EQ8WY54 764 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 SMARCC1Q92922 1105 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 JPH2Q9BR39 696 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 FAN1Q9Y2M0 1017 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 LY75O60449 1722 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 LRP5O75197 1615 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 TAF1LQ8IZX4 1826 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 EIF3JO75822 258 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms