RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 MIGA1Q8NAN2 632 aa26■■□□□ 1.75
TSPAN9-208ENST00000640568 GPR75-ASB3A0A0A6YYF3 556 aa25.99■■□□□ 1.75
TSPAN9-208ENST00000640568 CHGBP05060 677 aa25.99■■□□□ 1.75
TSPAN9-208ENST00000640568 SLFNL1Q499Z3 407 aa25.99■■□□□ 1.75
TSPAN9-208ENST00000640568 PRMT6Q96LA8 375 aaPredicted RBP25.99■■□□□ 1.75
TSPAN9-208ENST00000640568 MAGEB6P1A0A0J9YX57 407 aa25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 NBPF9Q3BBW0 867 aa25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 CERS3Q8IU89 383 aa25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 TMOD2Q9NZR1 351 aa25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 PLCG2P16885 1265 aa25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 APOBEC3HQ6NTF7 200 aaKnown RBP25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 AIDAQ96BJ3 306 aa25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 TDRD3Q9H7E2 651 aaKnown RBP25.98■■□□□ 1.75
TSPAN9-208ENST00000640568 ZMYM1Q5SVZ6 1142 aa25.97■■□□□ 1.75
TSPAN9-208ENST00000640568 ZBED3Q96IU2 234 aaPredicted RBP25.97■■□□□ 1.75
TSPAN9-208ENST00000640568 USP40Q9NVE5 1235 aa25.97■■□□□ 1.75
TSPAN9-208ENST00000640568 NMIQ13287 307 aaPredicted RBP25.96■■□□□ 1.75
TSPAN9-208ENST00000640568 CASC1Q6TDU7 716 aa25.96■■□□□ 1.75
TSPAN9-208ENST00000640568 HELLSQ9NRZ9 838 aa25.96■■□□□ 1.75
TSPAN9-208ENST00000640568 CLEC11AQ9Y240 323 aa25.96■■□□□ 1.75
TSPAN9-208ENST00000640568 CDK5RAP2Q96SN8 1893 aa25.96■■□□□ 1.75
TSPAN9-208ENST00000640568 CLRN2A0PK11 232 aa25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 MBD4O95243 580 aa25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 HIRAP54198 1017 aaPredicted RBP25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 PPP4CP60510 307 aa25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 DYNLL1P63167 89 aaKnown RBP25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 CDC42EP5Q6NZY7 148 aa25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 CWC27Q6UX04 472 aaKnown RBP25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 PUS7LQ9H0K6 701 aaKnown RBP25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 VEZTQ9HBM0 779 aa25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 POLR2AP24928 1970 aaKnown RBP25.95■■□□□ 1.74
TSPAN9-208ENST00000640568 RUFY2Q8WXA3 655 aa25.94■■□□□ 1.74
TSPAN9-208ENST00000640568 OSBP2Q969R2 916 aa25.94■■□□□ 1.74
TSPAN9-208ENST00000640568 FAM227BQ96M60 508 aa25.94■■□□□ 1.74
TSPAN9-208ENST00000640568 FOCADQ5VW36 1801 aa25.94■■□□□ 1.74
TSPAN9-208ENST00000640568 A0A0D9SFI3 127 aa25.93■■□□□ 1.74
TSPAN9-208ENST00000640568 CDC45O75419 566 aa25.93■■□□□ 1.74
TSPAN9-208ENST00000640568 SPDYE2Q495Y8 402 aa25.93■■□□□ 1.74
TSPAN9-208ENST00000640568 MCMDC2Q4G0Z9 681 aa25.93■■□□□ 1.74
TSPAN9-208ENST00000640568 TEX11Q8IYF3 940 aa25.93■■□□□ 1.74
TSPAN9-208ENST00000640568 GGA3Q9NZ52 723 aa25.93■■□□□ 1.74
TSPAN9-208ENST00000640568 ZNF70Q9UC06 446 aaPredicted RBP25.93■■□□□ 1.74
TSPAN9-208ENST00000640568 M0R2C6 588 aa25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 CHMLP26374 656 aa25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 ANGEL2Q5VTE6 544 aaKnown RBP25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 LCORLQ8N3X6 602 aa25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 SH3RF3Q8TEJ3 882 aaPredicted RBP25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 ZC3H15Q8WU90 426 aaKnown RBP25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 SEC62Q99442 399 aaKnown RBP25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 RIOK1Q9BRS2 568 aaKnown RBP25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 ARMT1Q9H993 441 aa25.92■■□□□ 1.74
TSPAN9-208ENST00000640568 GPAA1O43292 621 aa25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 DCPSQ96C86 337 aaKnown RBP25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 CRNKL1Q9BZJ0 848 aaKnown RBP25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 ASTN2O75129 1339 aaPredicted RBP25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 MFAP1P55081 439 aaKnown RBP25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 RHBDL3P58872 404 aa25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 TNFAIP1Q13829 316 aa25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 LDHDQ86WU2 507 aa25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 APOBEC3FQ8IUX4 373 aaKnown RBP25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 ZNF784Q8NCA9 323 aaPredicted RBP25.91■■□□□ 1.74
TSPAN9-208ENST00000640568 NAV1Q8NEY1 1877 aa25.9■■□□□ 1.74
TSPAN9-208ENST00000640568 USP5P45974 858 aa25.9■■□□□ 1.74
TSPAN9-208ENST00000640568 TNNI2P48788 182 aa25.9■■□□□ 1.74
TSPAN9-208ENST00000640568 CACNB3P54284 484 aa25.9■■□□□ 1.74
TSPAN9-208ENST00000640568 RAD50Q92878 1312 aa25.89■■□□□ 1.74
TSPAN9-208ENST00000640568 PITPNM2Q9BZ72 1349 aa25.89■■□□□ 1.74
TSPAN9-208ENST00000640568 TCP10L2B9ZVM9 353 aa25.89■■□□□ 1.73
TSPAN9-208ENST00000640568 MYH1P12882 1939 aa25.88■■□□□ 1.73
TSPAN9-208ENST00000640568 GNAT2P19087 354 aa25.88■■□□□ 1.73
TSPAN9-208ENST00000640568 PICALMQ13492 652 aa25.88■■□□□ 1.73
TSPAN9-208ENST00000640568 CCDC129Q6ZRS4 1044 aa25.88■■□□□ 1.73
TSPAN9-208ENST00000640568 TGFBRAP1Q8WUH2 860 aa25.88■■□□□ 1.73
TSPAN9-208ENST00000640568 SLC4A4Q9Y6R1 1079 aa25.88■■□□□ 1.73
TSPAN9-208ENST00000640568 POTEIP0CG38 1075 aa25.87■■□□□ 1.73
TSPAN9-208ENST00000640568 POTEJP0CG39 1038 aa25.87■■□□□ 1.73
TSPAN9-208ENST00000640568 SULF1Q8IWU6 871 aa25.87■■□□□ 1.73
TSPAN9-208ENST00000640568 DDRGK1Q96HY6 314 aa25.87■■□□□ 1.73
TSPAN9-208ENST00000640568 STRBPQ96SI9 672 aaKnown RBP25.87■■□□□ 1.73
TSPAN9-208ENST00000640568 CCDC171Q6TFL3 1326 aa25.87■■□□□ 1.73
TSPAN9-208ENST00000640568 FKBP1CQ5VVH2 108 aa25.86■■□□□ 1.73
TSPAN9-208ENST00000640568 IDI2Q9BXS1 227 aa25.86■■□□□ 1.73
TSPAN9-208ENST00000640568 BAZ2AQ9UIF9 1905 aaKnown RBP25.86■■□□□ 1.73
TSPAN9-208ENST00000640568 KIF3CO14782 793 aa25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 WDHD1O75717 1129 aaPredicted RBP25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 NFIAQ12857 509 aa25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 MAPKAPK5Q8IW41 473 aa25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 SDR42E1Q8WUS8 393 aa25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 PGAP2Q9UHJ9 254 aa25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 APPP05067 770 aa25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 TCP10Q12799 353 aa25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 ZNF589Q86UQ0 364 aaPredicted RBP25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 SCAF8Q9UPN6 1271 aaKnown RBP25.85■■□□□ 1.73
TSPAN9-208ENST00000640568 KRT26Q7Z3Y9 468 aa25.84■■□□□ 1.73
TSPAN9-208ENST00000640568 FAM83AQ86UY5 434 aa25.84■■□□□ 1.73
TSPAN9-208ENST00000640568 ESYT1Q9BSJ8 1104 aa25.84■■□□□ 1.73
TSPAN9-208ENST00000640568 ATP8A2Q9NTI2 1148 aa25.84■■□□□ 1.73
TSPAN9-208ENST00000640568 FLT1P17948 1338 aa25.84■■□□□ 1.73
TSPAN9-208ENST00000640568 SGSM2O43147 1006 aa25.83■■□□□ 1.73
TSPAN9-208ENST00000640568 PRKAB2O43741 272 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms