RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 SMC1BQ8NDV3 1235 aa18.39■□□□□ 0.54
PAX6-268ENST00000640287 FAM163AQ96GL9 167 aaPredicted RBP18.39■□□□□ 0.54
PAX6-268ENST00000640287 AATFQ9NY61 560 aaKnown RBP eCLIP18.39■□□□□ 0.54
PAX6-268ENST00000640287 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.53
PAX6-268ENST00000640287 SPDYE2Q495Y8 402 aa18.39■□□□□ 0.53
PAX6-268ENST00000640287 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
PAX6-268ENST00000640287 ADGRA1Q86SQ6 560 aa18.39■□□□□ 0.53
PAX6-268ENST00000640287 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
PAX6-268ENST00000640287 MIGA1Q8NAN2 632 aa18.39■□□□□ 0.53
PAX6-268ENST00000640287 USP40Q9NVE5 1235 aa18.39■□□□□ 0.53
PAX6-268ENST00000640287 ZNF70Q9UC06 446 aaPredicted RBP18.39■□□□□ 0.53
PAX6-268ENST00000640287 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.53
PAX6-268ENST00000640287 MYH2Q9UKX2 1941 aa18.38■□□□□ 0.53
PAX6-268ENST00000640287 GPR75-ASB3A0A0A6YYF3 556 aa18.38■□□□□ 0.53
PAX6-268ENST00000640287 ADD2P35612 726 aa18.38■□□□□ 0.53
PAX6-268ENST00000640287 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
PAX6-268ENST00000640287 APOBEC3FQ8IUX4 373 aaKnown RBP18.38■□□□□ 0.53
PAX6-268ENST00000640287 RBM46Q8TBY0 533 aaKnown RBP18.38■□□□□ 0.53
PAX6-268ENST00000640287 SCAF8Q9UPN6 1271 aaKnown RBP18.38■□□□□ 0.53
PAX6-268ENST00000640287 RNF113AO15541 343 aaKnown RBP18.37■□□□□ 0.53
PAX6-268ENST00000640287 CACNB3P54284 484 aa18.37■□□□□ 0.53
PAX6-268ENST00000640287 CDC42EP5Q6NZY7 148 aa18.37■□□□□ 0.53
PAX6-268ENST00000640287 PGAP2Q9UHJ9 254 aa18.37■□□□□ 0.53
PAX6-268ENST00000640287 PITPNM2Q9BZ72 1349 aa18.37■□□□□ 0.53
PAX6-268ENST00000640287 TCP10L2B9ZVM9 353 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 CHGBP05060 677 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 ZFYP08048 801 aaPredicted RBP18.36■□□□□ 0.53
PAX6-268ENST00000640287 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
PAX6-268ENST00000640287 PLCG2P16885 1265 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 TNFAIP1Q13829 316 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 UBE3CQ15386 1083 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 SLFNL1Q499Z3 407 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 CDC37L1Q7L3B6 337 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
PAX6-268ENST00000640287 GLIS2Q9BZE0 524 aaPredicted RBP18.36■□□□□ 0.53
PAX6-268ENST00000640287 MAGEB6P1A0A0J9YX57 407 aa18.35■□□□□ 0.53
PAX6-268ENST00000640287 TCRBV5S4A2TA0A5A2 114 aa18.35■□□□□ 0.53
PAX6-268ENST00000640287 ADM5C9JUS6 153 aa18.35■□□□□ 0.53
PAX6-268ENST00000640287 TNNI2P48788 182 aa18.35■□□□□ 0.53
PAX6-268ENST00000640287 DYNLL1P63167 89 aaKnown RBP18.35■□□□□ 0.53
PAX6-268ENST00000640287 TEX11Q8IYF3 940 aa18.35■□□□□ 0.53
PAX6-268ENST00000640287 PICALMQ13492 652 aa18.34■□□□□ 0.53
PAX6-268ENST00000640287 CERS3Q8IU89 383 aa18.34■□□□□ 0.53
PAX6-268ENST00000640287 SH3RF3Q8TEJ3 882 aaPredicted RBP18.34■□□□□ 0.53
PAX6-268ENST00000640287 SDSP20132 328 aa18.33■□□□□ 0.53
PAX6-268ENST00000640287 PPP4CP60510 307 aa18.33■□□□□ 0.53
PAX6-268ENST00000640287 FSTL1Q12841 308 aa18.33■□□□□ 0.53
PAX6-268ENST00000640287 APPBP2Q92624 585 aa18.33■□□□□ 0.53
PAX6-268ENST00000640287 AIDAQ96BJ3 306 aa18.33■□□□□ 0.53
PAX6-268ENST00000640287 DEFB129Q9H1M3 183 aa18.33■□□□□ 0.53
PAX6-268ENST00000640287 ECM29Q5VYK3 1845 aa18.33■□□□□ 0.52
PAX6-268ENST00000640287 MBD4O95243 580 aa18.33■□□□□ 0.52
PAX6-268ENST00000640287 RHBDL3P58872 404 aa18.33■□□□□ 0.52
PAX6-268ENST00000640287 TCP10Q12799 353 aa18.33■□□□□ 0.52
PAX6-268ENST00000640287 NFIAQ12857 509 aa18.33■□□□□ 0.52
PAX6-268ENST00000640287 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.52
PAX6-268ENST00000640287 MYH7P12883 1935 aa18.32■□□□□ 0.52
PAX6-268ENST00000640287 TRAF5O00463 557 aa18.32■□□□□ 0.52
PAX6-268ENST00000640287 RASA3Q14644 834 aa18.32■□□□□ 0.52
PAX6-268ENST00000640287 LCORLQ8N3X6 602 aa18.32■□□□□ 0.52
PAX6-268ENST00000640287 RIOK1Q9BRS2 568 aaKnown RBP18.32■□□□□ 0.52
PAX6-268ENST00000640287 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
PAX6-268ENST00000640287 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
PAX6-268ENST00000640287 RFX7Q2KHR2 1363 aa18.32■□□□□ 0.52
PAX6-268ENST00000640287 WDHD1O75717 1129 aaPredicted RBP18.31■□□□□ 0.52
PAX6-268ENST00000640287 USP5P45974 858 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 FKBP1CQ5VVH2 108 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 PRAMEF18Q5VWM3 479 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 TGFBRAP1Q8WUH2 860 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 CRNKL1Q9BZJ0 848 aaKnown RBP18.31■□□□□ 0.52
PAX6-268ENST00000640287 ZNF408Q9H9D4 720 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 PPP2R3BQ9Y5P8 575 aa18.31■□□□□ 0.52
PAX6-268ENST00000640287 HIP1O00291 1037 aa18.3■□□□□ 0.52
PAX6-268ENST00000640287 BMP2KLQ5H9B9 411 aa18.3■□□□□ 0.52
PAX6-268ENST00000640287 TICAM2Q86XR7 235 aa18.3■□□□□ 0.52
PAX6-268ENST00000640287 MAPKAPK5Q8IW41 473 aa18.3■□□□□ 0.52
PAX6-268ENST00000640287 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
PAX6-268ENST00000640287 OSBP2Q969R2 916 aa18.3■□□□□ 0.52
PAX6-268ENST00000640287 CDCA5Q96FF9 252 aa18.3■□□□□ 0.52
PAX6-268ENST00000640287 TMEM39BQ9GZU3 492 aa18.3■□□□□ 0.52
PAX6-268ENST00000640287 M0R2C6 588 aa18.29■□□□□ 0.52
PAX6-268ENST00000640287 ITGBL1O95965 494 aaPredicted RBP18.29■□□□□ 0.52
PAX6-268ENST00000640287 ZMYM1Q5SVZ6 1142 aa18.29■□□□□ 0.52
PAX6-268ENST00000640287 FAM83AQ86UY5 434 aa18.29■□□□□ 0.52
PAX6-268ENST00000640287 SEC62Q99442 399 aaKnown RBP18.29■□□□□ 0.52
PAX6-268ENST00000640287 DDX4Q9NQI0 724 aaKnown RBP18.29■□□□□ 0.52
PAX6-268ENST00000640287 FAM198AQ9UFP1 575 aa18.29■□□□□ 0.52
PAX6-268ENST00000640287 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
PAX6-268ENST00000640287 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
PAX6-268ENST00000640287 GPAA1O43292 621 aa18.28■□□□□ 0.52
PAX6-268ENST00000640287 NF2P35240 595 aa18.28■□□□□ 0.52
PAX6-268ENST00000640287 FMR1Q06787 632 aaKnown RBP eCLIP18.28■□□□□ 0.52
PAX6-268ENST00000640287 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
PAX6-268ENST00000640287 FAM151AQ8WW52 585 aa18.28■□□□□ 0.52
PAX6-268ENST00000640287 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
PAX6-268ENST00000640287 POLR2AP24928 1970 aaKnown RBP18.28■□□□□ 0.52
PAX6-268ENST00000640287 FLT1P17948 1338 aa18.27■□□□□ 0.52
PAX6-268ENST00000640287 A0A0D9SFI3 127 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms