RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 ARHGEF6Q15052 776 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 AATFQ9NY61 560 aaKnown RBP eCLIP12.5□□□□□ -0.41
SCN1B-208ENST00000640135 TTF2Q9UNY4 1162 aaKnown RBP12.5□□□□□ -0.41
SCN1B-208ENST00000640135 ERVV-1B6SEH8 477 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 AK2P54819 239 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 DDX12PQ92771 950 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 GTF2IP78347 998 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 CCDC65Q8IXS2 484 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
SCN1B-208ENST00000640135 USPL1Q5W0Q7 1092 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 SYNCQ9H7C4 482 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 AKR1B10O60218 316 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 PCP11498 1178 aaKnown RBP12.49□□□□□ -0.41
SCN1B-208ENST00000640135 RPS6KB1P23443 525 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 CYLC1P35663 651 aaPredicted RBP12.49□□□□□ -0.41
SCN1B-208ENST00000640135 USP40Q9NVE5 1235 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 ABCC3O15438 1527 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 B4E1Z4 1266 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 AFMP43652 599 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 SMTNP53814 917 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 ENOX2Q16206 610 aaKnown RBP12.49□□□□□ -0.41
SCN1B-208ENST00000640135 SKIDA1Q1XH10 827 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 BRINP3Q76B58 766 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 KRT25Q7Z3Z0 450 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
SCN1B-208ENST00000640135 GPCPD1Q9NPB8 672 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 A2ML1A8K2U0 1454 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 XDHP47989 1333 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
SCN1B-208ENST00000640135 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 PATL2C9JE40 543 aaKnown RBP12.48□□□□□ -0.41
SCN1B-208ENST00000640135 ZSCAN30Q86W11 494 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 BLMP54132 1417 aaPredicted RBP12.48□□□□□ -0.41
SCN1B-208ENST00000640135 TRIM37O94972 964 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 GPR108Q9NPR9 543 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 ZMYM4Q5VZL5 1548 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 GOLGA6L7A0A1B0GV03 622 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 CASQ1P31415 396 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 LEKR1Q6ZMV7 388 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 CPLX3Q8WVH0 158 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 DCPSQ96C86 337 aaKnown RBP12.48□□□□□ -0.41
SCN1B-208ENST00000640135 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 SPC25Q9HBM1 224 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 ZNF532Q9HCE3 1301 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 SGSM2O43147 1006 aa12.48□□□□□ -0.41
SCN1B-208ENST00000640135 ZAP70P43403 619 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 OTUD7BQ6GQQ9 843 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 SV2BQ7L1I2 683 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 KLHDC4Q8TBB5 520 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 CTNNBL1Q8WYA6 563 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-208ENST00000640135 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 CEP83Q9Y592 693 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 CFAP65Q6ZU64 1925 aaKnown RBP12.47□□□□□ -0.41
SCN1B-208ENST00000640135 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
SCN1B-208ENST00000640135 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 MCM7P33993 719 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 NOP2P46087 812 aaKnown RBP12.47□□□□□ -0.41
SCN1B-208ENST00000640135 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 SMCR8Q8TEV9 937 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-208ENST00000640135 RNF123Q5XPI4 1314 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 CDC42BPAQ5VT25 1732 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 CIAO1O76071 339 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 SERPINB2P05120 415 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 KIF22Q14807 665 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 CCDC91Q7Z6B0 441 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 DHX58Q96C10 678 aa12.47□□□□□ -0.41
SCN1B-208ENST00000640135 H0YHG0 523 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 SLC27A2O14975 620 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 MARCKSP29966 332 aaPredicted RBP12.46□□□□□ -0.41
SCN1B-208ENST00000640135 CHST3Q7LGC8 479 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 TMC6Q7Z403 805 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 IFT74Q96LB3 600 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 EXOC7Q9UPT5 735 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 MACROD2A1Z1Q3 448 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 TMCO5BA8MYB1 307 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 ADCY7P51828 1080 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 LETM2Q2VYF4 491 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 MSL1Q68DK7 614 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 TAX1BP1Q86VP1 789 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 MAPKAPK5Q8IW41 473 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 TGFBRAP1Q8WUH2 860 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 COPRSQ9NQ92 184 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 ABCC4O15439 1325 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 ESPNB1AK53 854 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 NONOQ15233 471 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCN1B-208ENST00000640135 BEND3Q5T5X7 828 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 CLEC4GQ6UXB4 293 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 AZI2Q9H6S1 392 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 ATG3Q9NT62 314 aa12.46□□□□□ -0.41
SCN1B-208ENST00000640135 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms