RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NRXN2Q9P2S2 1712 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 MYH15Q9Y2K3 1946 aa17.72■□□□□ 0.43
TRIM3-215ENST00000639856 XDHP47989 1333 aa17.71■□□□□ 0.43
TRIM3-215ENST00000639856 ZNF213O14771 459 aa17.71■□□□□ 0.43
TRIM3-215ENST00000639856 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
TRIM3-215ENST00000639856 GPSM2P81274 684 aa17.71■□□□□ 0.43
TRIM3-215ENST00000639856 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.43
TRIM3-215ENST00000639856 ZNF384Q8TF68 577 aa17.71■□□□□ 0.43
TRIM3-215ENST00000639856 SPATA32Q96LK8 384 aa17.71■□□□□ 0.43
TRIM3-215ENST00000639856 TFIP11Q9UBB9 837 aaKnown RBP17.71■□□□□ 0.43
TRIM3-215ENST00000639856 SALL1Q9NSC2 1324 aa17.71■□□□□ 0.43
TRIM3-215ENST00000639856 PTPDC1A2A3K4 754 aa17.71■□□□□ 0.42
TRIM3-215ENST00000639856 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.42
TRIM3-215ENST00000639856 TBC1D10CQ8IV04 446 aa17.71■□□□□ 0.42
TRIM3-215ENST00000639856 NKX2-3Q8TAU0 364 aa17.71■□□□□ 0.42
TRIM3-215ENST00000639856 SEMA3EO15041 775 aa17.7■□□□□ 0.42
TRIM3-215ENST00000639856 UVSSAQ2YD98 709 aa17.7■□□□□ 0.42
TRIM3-215ENST00000639856 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
TRIM3-215ENST00000639856 ZSCAN30Q86W11 494 aa17.7■□□□□ 0.42
TRIM3-215ENST00000639856 LEO1Q8WVC0 666 aaPredicted RBP17.7■□□□□ 0.42
TRIM3-215ENST00000639856 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
TRIM3-215ENST00000639856 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 GSG1L2A8MUP6 293 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 PATL2C9JE40 543 aaKnown RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 MMP10P09238 476 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 HOXA10P31260 410 aaPredicted RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 MCM5P33992 734 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 EZH2Q15910 746 aaKnown RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 MB21D2Q8IYB1 491 aaPredicted RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 NCOA7Q8NI08 942 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 FUCA2Q9BTY2 467 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 LEMD3Q9Y2U8 911 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 GIMAP6Q6P9H5 292 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
TRIM3-215ENST00000639856 SLC4A4Q9Y6R1 1079 aa17.69■□□□□ 0.42
TRIM3-215ENST00000639856 CHD4Q14839 1912 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 PRC1O43663 620 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 RALYLQ86SE5 291 aaKnown RBP17.68■□□□□ 0.42
TRIM3-215ENST00000639856 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 GOLGA6L4A6NEF3 574 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 UFL1O94874 794 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 PRDX5P30044 214 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 ANTXR2P58335 489 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 NAPBQ9H115 298 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
TRIM3-215ENST00000639856 PDS5AQ29RF7 1337 aaKnown RBP17.67■□□□□ 0.42
TRIM3-215ENST00000639856 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
TRIM3-215ENST00000639856 LIG1P18858 919 aa17.67■□□□□ 0.42
TRIM3-215ENST00000639856 ALX1Q15699 326 aa17.67■□□□□ 0.42
TRIM3-215ENST00000639856 CRAMP1Q96RY5 1269 aa17.67■□□□□ 0.42
TRIM3-215ENST00000639856 INCENPQ9NQS7 918 aa17.67■□□□□ 0.42
TRIM3-215ENST00000639856 MAGEB6P1A0A0J9YX57 407 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 DYNLL1P63167 89 aaKnown RBP17.66■□□□□ 0.42
TRIM3-215ENST00000639856 MECOMQ03112 1051 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 SDR42E1Q8WUS8 393 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 NSUN4Q96CB9 384 aaKnown RBP17.66■□□□□ 0.42
TRIM3-215ENST00000639856 CAMKK2Q96RR4 588 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 RIOK1Q9BRS2 568 aaKnown RBP17.66■□□□□ 0.42
TRIM3-215ENST00000639856 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 LRRC37AA6NMS7 1700 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 ZMYM6O95789 1325 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 NEDD4P46934 1319 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 BBOX1O75936 387 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 TACC3Q9Y6A5 838 aa17.66■□□□□ 0.42
TRIM3-215ENST00000639856 LTBP1Q14766 1721 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 MAST2Q6P0Q8 1798 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 GNAT2P19087 354 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 TDO2P48775 406 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 FBXO41Q8TF61 875 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 NUP62CLQ9H1M0 184 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 DHX16O60231 1041 aaKnown RBP17.65■□□□□ 0.42
TRIM3-215ENST00000639856 SRGNP10124 158 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 MSNP26038 577 aaKnown RBP17.65■□□□□ 0.42
TRIM3-215ENST00000639856 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
TRIM3-215ENST00000639856 TRDNQ13061 729 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 PGBD1Q96JS3 809 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 POLLQ9UGP5 575 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
TRIM3-215ENST00000639856 NOL7Q9UMY1 257 aaKnown RBP17.65■□□□□ 0.42
TRIM3-215ENST00000639856 BAZ2AQ9UIF9 1905 aaKnown RBP17.64■□□□□ 0.42
TRIM3-215ENST00000639856 TIAM2Q8IVF5 1701 aa17.64■□□□□ 0.41
TRIM3-215ENST00000639856 KLF18A0A0U1RQI7 1052 aa17.64■□□□□ 0.41
TRIM3-215ENST00000639856 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
TRIM3-215ENST00000639856 FDPSP14324 419 aaKnown RBP17.64■□□□□ 0.41
TRIM3-215ENST00000639856 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
TRIM3-215ENST00000639856 CYB5R4Q7L1T6 521 aa17.64■□□□□ 0.41
TRIM3-215ENST00000639856 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
TRIM3-215ENST00000639856 DACT1Q9NYF0 836 aa17.64■□□□□ 0.41
TRIM3-215ENST00000639856 B4E1Z4 1266 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 CCDC192P0DO97 292 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 ATL3Q6DD88 541 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 C15orf52Q6ZUT6 534 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms