RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TNKS2Q9H2K2 1166 aa3.19□□□□□ -1.9
LMBR1-222ENST00000638959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.19□□□□□ -1.98e-8■■■■■ 44.9
LMBR1-222ENST00000638959 FAM13BQ9NYF5 915 aa3.19□□□□□ -1.9
LMBR1-222ENST00000638959 SNX11Q9Y5W9 270 aa3.19□□□□□ -1.9
LMBR1-222ENST00000638959 LEFTY1O75610 366 aa3.18□□□□□ -1.9
LMBR1-222ENST00000638959 EFEMP1Q12805 493 aa3.18□□□□□ -1.9
LMBR1-222ENST00000638959 BAHD1Q8TBE0 780 aaPredicted RBP3.18□□□□□ -1.9
LMBR1-222ENST00000638959 MENTQ9BUN1 341 aa3.18□□□□□ -1.9
LMBR1-222ENST00000638959 CNOT6Q9ULM6 557 aaKnown RBP3.18□□□□□ -1.9
LMBR1-222ENST00000638959 ATP9BO43861 1147 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 CTSBP07858 339 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 ESRRAP11474 423 aaPredicted RBP3.17□□□□□ -1.9
LMBR1-222ENST00000638959 SRFP11831 508 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 MAOBP27338 520 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 GDNFP39905 211 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 TMEM102Q8N9M5 508 aaPredicted RBP3.17□□□□□ -1.9
LMBR1-222ENST00000638959 SLC16A11Q8NCK7 471 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 ASAP3Q8TDY4 903 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 GSX1Q9H4S2 264 aaPredicted RBP3.17□□□□□ -1.9
LMBR1-222ENST00000638959 PIDD1Q9HB75 910 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 SEMA3GQ9NS98 782 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 C19orf73Q9NVV2 129 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 SALL4Q9UJQ4 1053 aa3.17□□□□□ -1.9
LMBR1-222ENST00000638959 RFXAPO00287 272 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 GRIN3BO60391 1043 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 EIF4EBP3O60516 100 aaPredicted RBP3.16□□□□□ -1.9
LMBR1-222ENST00000638959 BRD2P25440 801 aaKnown RBP3.16□□□□□ -1.9
LMBR1-222ENST00000638959 HMGA2P52926 109 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 PLP2Q04941 152 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 ZNF385BQ569K4 471 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 COX20Q5RI15 118 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 TMEM151BQ8IW70 566 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 ZDHHC14Q8IZN3 488 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 FEZF2Q8TBJ5 459 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 DUSP23Q9BVJ7 150 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 NRSN2Q9GZP1 204 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 CARS2Q9HA77 564 aaKnown RBP3.16□□□□□ -1.9
LMBR1-222ENST00000638959 TMEM63CQ9P1W3 806 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.16□□□□□ -1.9
LMBR1-222ENST00000638959 ADAMTS20P59510 1910 aa3.16□□□□□ -1.9
LMBR1-222ENST00000638959 FSHBP01225 129 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 CES1P23141 567 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 DPYDQ12882 1025 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 POU4F3Q15319 338 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 ABHD4Q8TB40 342 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 GPR152Q8TDT2 470 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 SORCS2Q96PQ0 1159 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 BDH2Q9BUT1 245 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 ELP3Q9H9T3 547 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 PALD1Q9ULE6 856 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 KCTD3Q9Y597 815 aa3.15□□□□□ -1.91
LMBR1-222ENST00000638959 CYP11A1P05108 521 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 RAC2P15153 192 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 TNFRSF1AP19438 455 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 WEE1P30291 646 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 ZAP70P43403 619 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 DLG4P78352 724 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 LARP1Q6PKG0 1096 aaKnown RBP3.14□□□□□ -1.91
LMBR1-222ENST00000638959 ZNF438Q7Z4V0 828 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 SPACA3Q8IXA5 215 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 NXPE3Q969Y0 559 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 OSMRQ99650 979 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 ADAM7Q9H2U9 754 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 ZFYVE1Q9HBF4 777 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 CNTN3Q9P232 1028 aa3.14□□□□□ -1.91
LMBR1-222ENST00000638959 PDE3AQ14432 1141 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 PDE12Q6L8Q7 609 aaKnown RBP3.13□□□□□ -1.91
LMBR1-222ENST00000638959 HHIPL2Q6UWX4 724 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 SMYD4Q8IYR2 804 aaPredicted RBP3.13□□□□□ -1.91
LMBR1-222ENST00000638959 TOP6BLQ8N6T0 577 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 C1orf127Q8N9H9 656 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 CCDC120Q96HB5 630 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 TEPSINQ96N21 525 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 UCN2Q96RP3 112 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 CORO1BQ9BR76 489 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 ZKSCAN3Q9BRR0 538 aa3.13□□□□□ -1.91
LMBR1-222ENST00000638959 AOC2O75106 756 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 ECEL1O95672 775 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 CRB2Q5IJ48 1285 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 FAM26DQ5JW98 314 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 WWC1Q8IX03 1113 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 WDR18Q9BV38 432 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 MCOLN1Q9GZU1 580 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 PPP1R9AQ9ULJ8 1098 aa3.12□□□□□ -1.91
LMBR1-222ENST00000638959 TMPRSS2O15393 492 aa3.11□□□□□ -1.91
LMBR1-222ENST00000638959 RNGTTO60942 597 aaKnown RBP3.11□□□□□ -1.91
LMBR1-222ENST00000638959 SEMA7AO75326 666 aa3.11□□□□□ -1.91
LMBR1-222ENST00000638959 CLCN7P51798 805 aa3.11□□□□□ -1.91
LMBR1-222ENST00000638959 TMEM132EQ6IEE7 984 aa3.11□□□□□ -1.91
LMBR1-222ENST00000638959 SP8Q8IXZ3 490 aa3.11□□□□□ -1.91
LMBR1-222ENST00000638959 HEXIM2Q96MH2 286 aaKnown RBP3.11□□□□□ -1.91
LMBR1-222ENST00000638959 ATXN3LQ9H3M9 355 aa3.11□□□□□ -1.91
LMBR1-222ENST00000638959 GTF2IRD1Q9UHL9 959 aa3.11□□□□□ -1.91
LMBR1-222ENST00000638959 ZC3H12DA2A288 527 aaKnown RBP3.1□□□□□ -1.91
LMBR1-222ENST00000638959 GNAT3A8MTJ3 354 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 MATN3O15232 486 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 PI3P19957 117 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 PTK7Q13308 1070 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 SSPNQ14714 243 aa3.1□□□□□ -1.91
LMBR1-222ENST00000638959 ZNF827Q17R98 1081 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms