RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TRAK1Q9UPV9 953 aa7.19□□□□□ -1.26
CCDC7-211ENST00000638889 EIF1AYO14602 144 aaKnown RBP7.18□□□□□ -1.26
CCDC7-211ENST00000638889 ECEL1O95672 775 aa7.18□□□□□ -1.26
CCDC7-211ENST00000638889 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.26
CCDC7-211ENST00000638889 PDE3AQ14432 1141 aa7.18□□□□□ -1.26
CCDC7-211ENST00000638889 OGFOD3Q6PK18 319 aa7.18□□□□□ -1.26
CCDC7-211ENST00000638889 ZNF765Q7L2R6 523 aa7.18□□□□□ -1.26
CCDC7-211ENST00000638889 TXNDC2Q86VQ3 553 aa7.18□□□□□ -1.26
CCDC7-211ENST00000638889 C1GALT1Q9NS00 363 aa7.18□□□□□ -1.26
CCDC7-211ENST00000638889 ZC3H7BQ9UGR2 993 aaKnown RBP7.18□□□□□ -1.26
CCDC7-211ENST00000638889 TMEM238LA0A1B0GVL6 79 aa7.17□□□□□ -1.26
CCDC7-211ENST00000638889 IGHA2P01877 340 aa7.17□□□□□ -1.26
CCDC7-211ENST00000638889 PDE4CQ08493 712 aa7.17□□□□□ -1.26
CCDC7-211ENST00000638889 ALKBH8Q96BT7 664 aaKnown RBP7.17□□□□□ -1.26
CCDC7-211ENST00000638889 DMRTB1Q96MA1 342 aa7.17□□□□□ -1.26
CCDC7-211ENST00000638889 GADD45BO75293 160 aaPredicted RBP7.16□□□□□ -1.26
CCDC7-211ENST00000638889 SLFN14P0C7P3 912 aa7.16□□□□□ -1.26
CCDC7-211ENST00000638889 CYP27C1Q4G0S4 372 aa7.16□□□□□ -1.26
CCDC7-211ENST00000638889 C14orf37Q86TY3 774 aa7.16□□□□□ -1.26
CCDC7-211ENST00000638889 FLCNQ8NFG4 579 aa7.16□□□□□ -1.26
CCDC7-211ENST00000638889 LRRC4CQ9HCJ2 640 aa7.16□□□□□ -1.26
CCDC7-211ENST00000638889 PPP1R9AQ9ULJ8 1098 aa7.16□□□□□ -1.26
CCDC7-211ENST00000638889 DAGLAQ9Y4D2 1042 aa7.16□□□□□ -1.26
CCDC7-211ENST00000638889 GPR182O15218 404 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 TMPRSS2O15393 492 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 JUNBP17275 347 aaPredicted RBP7.15□□□□□ -1.26
CCDC7-211ENST00000638889 STK11IPQ8N1F8 1099 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 ASIC4Q96FT7 647 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 NIF3L1Q9GZT8 377 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 PAK6Q9NQU5 681 aaPredicted RBP7.15□□□□□ -1.26
CCDC7-211ENST00000638889 KRT82Q9NSB4 513 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 CRIM1Q9NZV1 1036 aa7.15□□□□□ -1.26
CCDC7-211ENST00000638889 DYNC1LI2O43237 492 aaPredicted RBP7.14□□□□□ -1.27
CCDC7-211ENST00000638889 ITGB5P18084 799 aa7.14□□□□□ -1.27
CCDC7-211ENST00000638889 GLIS3Q8NEA6 775 aa7.14□□□□□ -1.27
CCDC7-211ENST00000638889 CSRNP1Q96S65 589 aa7.14□□□□□ -1.27
CCDC7-211ENST00000638889 RBCK1Q9BYM8 510 aa7.14□□□□□ -1.27
CCDC7-211ENST00000638889 ATXN3LQ9H3M9 355 aa7.14□□□□□ -1.27
CCDC7-211ENST00000638889 CCDC86Q9H6F5 360 aaKnown RBP7.14□□□□□ -1.27
CCDC7-211ENST00000638889 LIG1P18858 919 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 GRM2Q14416 872 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 COL19A1Q14993 1142 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 KIF4BQ2VIQ3 1234 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 CCER1Q8TC90 406 aaPredicted RBP7.13□□□□□ -1.27
CCDC7-211ENST00000638889 BCL7CQ8WUZ0 217 aaPredicted RBP7.13□□□□□ -1.27
CCDC7-211ENST00000638889 MISP3Q96FF7 219 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 PIDD1Q9HB75 910 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 PPP4R2Q9NY27 417 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 SLC5A6Q9Y289 635 aa7.13□□□□□ -1.27
CCDC7-211ENST00000638889 GSTP1P09211 210 aaKnown RBP7.12□□□□□ -1.27
CCDC7-211ENST00000638889 XRCC5P13010 732 aaKnown RBP7.12□□□□□ -1.27
CCDC7-211ENST00000638889 ID3Q02535 119 aa7.12□□□□□ -1.27
CCDC7-211ENST00000638889 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
CCDC7-211ENST00000638889 FAAP100Q0VG06 881 aa7.12□□□□□ -1.27
CCDC7-211ENST00000638889 ZNF157P51786 506 aaPredicted RBP7.11□□□□□ -1.27
CCDC7-211ENST00000638889 DTHD1Q6ZMT9 781 aa7.11□□□□□ -1.27
CCDC7-211ENST00000638889 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
CCDC7-211ENST00000638889 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
CCDC7-211ENST00000638889 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
CCDC7-211ENST00000638889 TMEM39AQ9NV64 488 aa7.11□□□□□ -1.27
CCDC7-211ENST00000638889 NLRP2Q9NX02 1062 aa7.11□□□□□ -1.27
CCDC7-211ENST00000638889 ZNF862O60290 1169 aa7.1□□□□□ -1.27
CCDC7-211ENST00000638889 SMYD4Q8IYR2 804 aaPredicted RBP7.1□□□□□ -1.27
CCDC7-211ENST00000638889 LGR6Q9HBX8 967 aa7.1□□□□□ -1.27
CCDC7-211ENST00000638889 DISC1Q9NRI5 854 aa7.1□□□□□ -1.27
CCDC7-211ENST00000638889 PCDHGC5Q9Y5F6 944 aa7.1□□□□□ -1.27
CCDC7-211ENST00000638889 OGFOD2Q6N063 350 aa7.09□□□□□ -1.27
CCDC7-211ENST00000638889 PDZD3Q86UT5 571 aa7.09□□□□□ -1.27
CCDC7-211ENST00000638889 NETO1Q8TDF5 533 aa7.09□□□□□ -1.27
CCDC7-211ENST00000638889 ZC3H12CQ9C0D7 883 aaKnown RBP7.09□□□□□ -1.27
CCDC7-211ENST00000638889 MKNK2Q9HBH9 465 aa7.09□□□□□ -1.27
CCDC7-211ENST00000638889 GPN3Q9UHW5 284 aaPredicted RBP7.09□□□□□ -1.27
CCDC7-211ENST00000638889 PCOLCE2Q9UKZ9 415 aa7.09□□□□□ -1.27
CCDC7-211ENST00000638889 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
CCDC7-211ENST00000638889 FAM87AP0C7U9 286 aa7.08□□□□□ -1.28
CCDC7-211ENST00000638889 FCGRTP55899 365 aa7.08□□□□□ -1.28
CCDC7-211ENST00000638889 CDK5R2Q13319 367 aa7.08□□□□□ -1.28
CCDC7-211ENST00000638889 POU5F2Q8N7G0 328 aa7.08□□□□□ -1.28
CCDC7-211ENST00000638889 SOWAHDA6NJG2 315 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 BIN1O00499 593 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 FZD5Q13467 585 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 TTLL4Q14679 1199 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 PLCL1Q15111 1095 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 WFDC3Q8IUB2 231 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 RETREG2Q8NC44 543 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 BCO2Q9BYV7 579 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 VAV3Q9UKW4 847 aa7.07□□□□□ -1.28
CCDC7-211ENST00000638889 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 RNGTTO60942 597 aaKnown RBP7.06□□□□□ -1.28
CCDC7-211ENST00000638889 ARNTP27540 789 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 PRKCQQ04759 706 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 ZNF574Q6ZN55 896 aaPredicted RBP7.06□□□□□ -1.28
CCDC7-211ENST00000638889 TMC7Q7Z402 723 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 SPRED2Q7Z698 418 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 SULF2Q8IWU5 870 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 KCNB2Q92953 911 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 EMILIN2Q9BXX0 1053 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 DCTN4Q9UJW0 460 aa7.06□□□□□ -1.28
CCDC7-211ENST00000638889 PAPLNO95428 1278 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms