RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 ATP8A2Q9NTI2 1148 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.15
LINC00643-207ENST00000637212 DAGLAQ9Y4D2 1042 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 RBM8AQ9Y5S9 174 aaKnown RBP16■□□□□ 0.15
LINC00643-207ENST00000637212 SLC4A4Q9Y6R1 1079 aa16■□□□□ 0.15
LINC00643-207ENST00000637212 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 COL4A5P29400 1685 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 ARFGEF1Q9Y6D6 1849 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 FGAP02671 866 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 APPP05067 770 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 BTDP43251 543 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 DYNLL1P63167 89 aaKnown RBP15.99■□□□□ 0.15
LINC00643-207ENST00000637212 TSGA10IPQ3SY00 556 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 IFNL3Q8IZI9 196 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 MTMR14Q8NCE2 650 aa15.99■□□□□ 0.15
LINC00643-207ENST00000637212 ZMYM6O95789 1325 aa15.98■□□□□ 0.15
LINC00643-207ENST00000637212 FOXP2O15409 715 aa15.98■□□□□ 0.15
LINC00643-207ENST00000637212 ZKSCAN1P17029 563 aaPredicted RBP15.98■□□□□ 0.15
LINC00643-207ENST00000637212 SCNN1DP51172 638 aa15.98■□□□□ 0.15
LINC00643-207ENST00000637212 C9orf131Q5VYM1 1079 aa15.98■□□□□ 0.15
LINC00643-207ENST00000637212 APOBEC3HQ6NTF7 200 aaKnown RBP15.98■□□□□ 0.15
LINC00643-207ENST00000637212 GPC2Q8N158 579 aa15.98■□□□□ 0.15
LINC00643-207ENST00000637212 DDRGK1Q96HY6 314 aa15.98■□□□□ 0.15
LINC00643-207ENST00000637212 RNF181Q9P0P0 153 aa15.98■□□□□ 0.15
LINC00643-207ENST00000637212 ZBTB12Q9Y330 459 aaPredicted RBP15.98■□□□□ 0.15
LINC00643-207ENST00000637212 PRKAB2O43741 272 aa15.97■□□□□ 0.15
LINC00643-207ENST00000637212 RHBDL3P58872 404 aa15.97■□□□□ 0.15
LINC00643-207ENST00000637212 ZNF280AP59817 542 aaPredicted RBP15.97■□□□□ 0.15
LINC00643-207ENST00000637212 CREB3L3Q68CJ9 461 aa15.97■□□□□ 0.15
LINC00643-207ENST00000637212 SH3RF3Q8TEJ3 882 aaPredicted RBP15.97■□□□□ 0.15
LINC00643-207ENST00000637212 USP40Q9NVE5 1235 aa15.97■□□□□ 0.15
LINC00643-207ENST00000637212 ZC3H4Q9UPT8 1303 aaKnown RBP15.96■□□□□ 0.15
LINC00643-207ENST00000637212 SLC27A2O14975 620 aa15.96■□□□□ 0.15
LINC00643-207ENST00000637212 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
LINC00643-207ENST00000637212 DLGAP5Q15398 846 aa15.96■□□□□ 0.15
LINC00643-207ENST00000637212 CFAP100Q494V2 611 aa15.96■□□□□ 0.15
LINC00643-207ENST00000637212 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
LINC00643-207ENST00000637212 ZNF213O14771 459 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 GMPSP49915 693 aaPredicted RBP15.95■□□□□ 0.14
LINC00643-207ENST00000637212 RBM5P52756 815 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC00643-207ENST00000637212 KRT32Q14532 448 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 IMMTQ16891 758 aaKnown RBP15.95■□□□□ 0.14
LINC00643-207ENST00000637212 SBK1Q52WX2 424 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 DPY19L2Q6NUT2 758 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 CDC42EP5Q6NZY7 148 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 TEX11Q8IYF3 940 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 NAPBQ9H115 298 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
LINC00643-207ENST00000637212 SNX14Q9Y5W7 946 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 GJA3Q9Y6H8 435 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 DOCK2Q92608 1830 aa15.95■□□□□ 0.14
LINC00643-207ENST00000637212 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
LINC00643-207ENST00000637212 USP5P45974 858 aa15.94■□□□□ 0.14
LINC00643-207ENST00000637212 TDO2P48775 406 aa15.94■□□□□ 0.14
LINC00643-207ENST00000637212 ZNF784Q8NCA9 323 aaPredicted RBP15.94■□□□□ 0.14
LINC00643-207ENST00000637212 PRMT6Q96LA8 375 aaPredicted RBP15.94■□□□□ 0.14
LINC00643-207ENST00000637212 KIF2CQ99661 725 aa15.94■□□□□ 0.14
LINC00643-207ENST00000637212 TM6SF1Q9BZW5 370 aa15.94■□□□□ 0.14
LINC00643-207ENST00000637212 DCP1AQ9NPI6 582 aaPredicted RBP15.94■□□□□ 0.14
LINC00643-207ENST00000637212 CNOT7Q9UIV1 285 aaKnown RBP15.94■□□□□ 0.14
LINC00643-207ENST00000637212 SPDYE2BA6NHP3 402 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 H7C1D1 291 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 CYP21A2P08686 494 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 SPDYE6P0CI01 402 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 PSMA5P28066 241 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 TGFBRAP1Q8WUH2 860 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 SDR42E1Q8WUS8 393 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 ZBED3Q96IU2 234 aaPredicted RBP15.93■□□□□ 0.14
LINC00643-207ENST00000637212 IDI2Q9BXS1 227 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 EPB41L4AQ9HCS5 686 aaPredicted RBP15.93■□□□□ 0.14
LINC00643-207ENST00000637212 MYOZ2Q9NPC6 264 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 ANAPC4Q9UJX5 808 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
LINC00643-207ENST00000637212 RABEP1Q15276 862 aa15.92■□□□□ 0.14
LINC00643-207ENST00000637212 FKBP1CQ5VVH2 108 aa15.92■□□□□ 0.14
LINC00643-207ENST00000637212 CTR9Q6PD62 1173 aa15.92■□□□□ 0.14
LINC00643-207ENST00000637212 ARPP21Q9UBL0 812 aaPredicted RBP15.92■□□□□ 0.14
LINC00643-207ENST00000637212 AK9Q5TCS8 1911 aa15.92■□□□□ 0.14
LINC00643-207ENST00000637212 USP17L12C9JPN9 530 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 USP17L21D6R901 530 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 MYO1BO43795 1136 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 WDHD1O75717 1129 aaPredicted RBP15.91■□□□□ 0.14
LINC00643-207ENST00000637212 HMGB1P09429 215 aaKnown RBP15.91■□□□□ 0.14
LINC00643-207ENST00000637212 PCP11498 1178 aaKnown RBP15.91■□□□□ 0.14
LINC00643-207ENST00000637212 NT5C2P49902 561 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 MICALL2Q8IY33 904 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 AMOTL1Q8IY63 956 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 MCM9Q9NXL9 1143 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 GPRC5DQ9NZD1 345 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
LINC00643-207ENST00000637212 SCN9AQ15858 1988 aa15.9■□□□□ 0.14
LINC00643-207ENST00000637212 ENTPD3O75355 529 aa15.9■□□□□ 0.14
LINC00643-207ENST00000637212 SLC3A2P08195 630 aaKnown RBP15.9■□□□□ 0.14
LINC00643-207ENST00000637212 PPARAQ07869 468 aa15.9■□□□□ 0.14
LINC00643-207ENST00000637212 MAPKAPK5Q8IW41 473 aa15.9■□□□□ 0.14
LINC00643-207ENST00000637212 RNF41Q9H4P4 317 aaPredicted RBP15.9■□□□□ 0.14
LINC00643-207ENST00000637212 TDRD3Q9H7E2 651 aaKnown RBP15.9■□□□□ 0.14
LINC00643-207ENST00000637212 ZSWIM6Q9HCJ5 1215 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms