RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ANKRD24Q8TF21 1146 aa17.87■□□□□ 0.45
CACNA1A-235ENST00000637004 HNRNPLLQ8WVV9 542 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-235ENST00000637004 KIFC2Q96AC6 838 aa17.87■□□□□ 0.45
CACNA1A-235ENST00000637004 HSPD1P10809 573 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-235ENST00000637004 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-235ENST00000637004 GOLGA6L1Q8N7Z2 621 aa17.87■□□□□ 0.45
CACNA1A-235ENST00000637004 TMEM232C9JQI7 657 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 RFX5P48382 616 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 TUBB4BP68371 445 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 TBX2Q13207 712 aaPredicted RBP17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 NOM1Q5C9Z4 860 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 ZMYM1Q5SVZ6 1142 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 MEX3CQ5U5Q3 659 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 CHST3Q7LGC8 479 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 FANCLQ9NW38 375 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 EIF3JO75822 258 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 GOLGA8FQ08AF8 430 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 GOLGA8DPQ0D2H9 430 aa17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 RRP15Q9Y3B9 282 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-235ENST00000637004 CPLX1O14810 134 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 PDILTQ8N807 584 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 DHX58Q96C10 678 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 HPSEQ9Y251 543 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 LMO7Q8WWI1 1683 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 H3BQF6 201 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 WDHD1O75717 1129 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 KIF23Q02241 960 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 HDXQ7Z353 690 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 CCDC12Q8WUD4 166 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 PAG1Q9NWQ8 432 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 MROH7-TTC4A0A0A0MT08 1334 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 PPP6R2O75170 966 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 ERLIN1O75477 346 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 CHMP4BP1P59074 171 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 SPECC1LQ69YQ0 1117 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 METTL22Q9BUU2 404 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 LCMT1Q9UIC8 334 aa17.85■□□□□ 0.45
CACNA1A-235ENST00000637004 COL16A1Q07092 1604 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 GOLIM4O00461 696 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 TRIM66O15016 1216 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 GYS2P54840 703 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 SRGAP1Q7Z6B7 1085 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 LAMA4Q16363 1823 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 USP54Q70EL1 1684 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 MARCKSP29966 332 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 PDIA6Q15084 440 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 TOGARAM2Q6ZUX3 1019 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 MYD88Q99836 296 aa17.84■□□□□ 0.45
CACNA1A-235ENST00000637004 FAM237AA0A1B0GTK4 181 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 PNOCQ13519 176 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 TUBB2AQ13885 445 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 RABL6Q3YEC7 729 aaPredicted RBP17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 CEP112Q8N8E3 955 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 TC2NQ8N9U0 490 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 NGLY1Q96IV0 654 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 TUBB2BQ9BVA1 445 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 INTS13Q9NVM9 706 aa17.83■□□□□ 0.45
CACNA1A-235ENST00000637004 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
CACNA1A-235ENST00000637004 CCDC102BQ68D86 513 aa17.83■□□□□ 0.44
CACNA1A-235ENST00000637004 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
CACNA1A-235ENST00000637004 VPS18Q9P253 973 aa17.83■□□□□ 0.44
CACNA1A-235ENST00000637004 HOOK1Q9UJC3 728 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-235ENST00000637004 AXIN2Q9Y2T1 843 aa17.83■□□□□ 0.44
CACNA1A-235ENST00000637004 KIF1AQ12756 1690 aa17.83■□□□□ 0.44
CACNA1A-235ENST00000637004 KIF28PB7ZC32 967 aa17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 CCDC175P0C221 793 aa17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 USP5P45974 858 aa17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 NHSL1Q5SYE7 1610 aa17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 AHDC1Q5TGY3 1603 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 KLF18A0A0U1RQI7 1052 aa17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 RPS6KA5O75582 802 aa17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 MARF1Q9Y4F3 1742 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-235ENST00000637004 A0A0G2JLW4 131 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 CUTAO60888 179 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 NOP2P46087 812 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 SHC4Q6S5L8 630 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 PDE11AQ9HCR9 933 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 RAB21Q9UL25 225 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 MAST3O60307 1309 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 RNF113AO15541 343 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 MCM6Q14566 821 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 EP400Q96L91 3159 aa17.81■□□□□ 0.44
CACNA1A-235ENST00000637004 ADKP55263 362 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 RESP18Q5W5W9 173 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 CNNM3Q8NE01 707 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 XAGE3Q8WTP9 111 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 DACH1Q9UI36 760 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 KARSQ15046 597 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 IMMTQ16891 758 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 GPHNQ9NQX3 736 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 CDC23Q9UJX2 597 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 HPS5Q9UPZ3 1129 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 PCDHA5Q9Y5H7 936 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms