RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	HS2ST1	Q7LGA3	356 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TXLNB	Q8N3L3	684 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	DIS3L	Q8TF46	1054 aa	Known RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ZC3H12C	Q9C0D7	883 aa	Known RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PNMA3	Q9UL41	463 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	GINS2	Q9Y248	185 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ITSN2	Q9NZM3	1697 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TP53BP1	Q12888	1972 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	VEGFA	P15692	232 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	USP8	P40818	1118 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	AK2	P54819	239 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PDCL	Q13371	301 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CCDC93	Q567U6	631 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CNNM4	Q6P4Q7	775 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	C16orf62	Q7Z3J2	963 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	RPUSD2	Q8IZ73	545 aa	Known RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ZNF654	Q8IZM8	581 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TAGAP	Q8N103	731 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CLUAP1	Q96AJ1	413 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	FMNL2	Q96PY5	1086 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TRIM6	Q9C030	488 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ANKIB1	Q9P2G1	1089 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ORC3	Q9UBD5	711 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	SUPT3H	B4E1H0	165 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	DYNC1I1	O14576	645 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	HLA-DOA	P06340	250 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PPP2R5D	Q14738	602 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ZNF449	Q6P9G9	518 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	C3orf67	Q6ZVT6	689 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	LUZP1	Q86V48	1076 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PGBD3	Q8N328	593 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	SHCBP1	Q8NEM2	672 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	NEUROD6	Q96NK8	337 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PRAM1	Q96QH2	718 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ZNF304	Q9HCX3	659 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	GIMAP4	Q9NUV9	329 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	DBR1	Q9UK59	544 aa	Known RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CD2AP	Q9Y5K6	639 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TACC3	Q9Y6A5	838 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TRPM6	Q9BX84	2022 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	NCOA1	Q15788	1441 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PSD	A5PKW4	1024 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CHMP2A	O43633	222 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	NLRP5	P59047	1200 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ZSCAN23	Q3MJ62	389 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	FAM47C	Q5HY64	1035 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TTC23	Q5W5X9	447 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	USP37	Q86T82	979 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ANKRD35	Q8N283	1001 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	NAP1L3	Q99457	506 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	FAM114A2	Q9NRY5	505 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	SYNPO2	Q9UMS6	1093 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	DOLK	Q9UPQ8	538 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	SEMA3E	O15041	775 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	RAP1GDS1	P52306	607 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	FSTL1	Q12841	308 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PKN2	Q16513	984 aa	Known RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	MTERF2	Q49AM1	385 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	FILIP1L	Q4L180	1135 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	SMC6	Q96SB8	1091 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CCT7	Q99832	543 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CLSTN2	Q9H4D0	955 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	NAIP	Q13075	1403 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ROS1	P08922	2347 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	KDM5C	P41229	1560 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	FLG2	Q5D862	2391 aa	Predicted RBP	3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PPFIA2	O75334	1257 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	KRT38	O76015	456 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	PAFAH1B1	P43034	410 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	IRX4	P78413	519 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	CALCOCO2	Q13137	446 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ALKBH2	Q6NS38	261 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	IFT20	Q8IY31	132 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	LARGE2	Q8N3Y3	721 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	IFT81	Q8WYA0	676 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ANO3	Q9BYT9	981 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	SLITRK6	Q9H5Y7	841 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	AS3MT	Q9HBK9	375 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	TXNDC16	Q9P2K2	825 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	MOSPD1	Q9UJG1	213 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	IKBKG	Q9Y6K9	419 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	KIF7	Q2M1P5	1343 aa		3.12	□□□□□ -1.91
CACNB4-238	ENST00000636901	ABCC5	O15440	1437 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	U2AF1L5	P0DN76	240 aa	Predicted RBP	3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	COPB2	P35606	906 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	TERF1	P54274	439 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	U2AF1	Q01081	240 aa	Known RBP eCLIP	3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	DZIP3	Q86Y13	1208 aa	Known RBP	3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	VPS37A	Q8NEZ2	397 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	WDR60	Q8WVS4	1066 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	SMARCE1	Q969G3	411 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	CCDC114	Q96M63	670 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	NUP62CL	Q9H1M0	184 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	CNNM1	Q9NRU3	951 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	ZNF232	Q9UNY5	417 aa		3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	LUC7L2	Q9Y383	392 aa	Known RBP	3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	LRRFIP2	Q9Y608	721 aa	Known RBP	3.11	□□□□□ -1.91
CACNB4-238	ENST00000636901	MYO3B	Q8WXR4	1341 aa		3.11	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms