RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	TMEM139	Q8IV31	216 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	NSUN7	Q8NE18	718 aa	Known RBP	6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	N4BP2L2	Q92802	583 aa	Predicted RBP	6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	RTEL1	Q9NZ71	1219 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	CAMSAP1	Q5T5Y3	1602 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	EFCAB6	Q5THR3	1501 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	CHUK	O15111	745 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	SYK	P43405	635 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	WHAMMP3	Q1A5X7	153 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	HDGFL1	Q5TGJ6	251 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	TC2N	Q8N9U0	490 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	LINC00301	Q8NCQ3	95 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	SMARCC2	Q8TAQ2	1214 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	CPLX3	Q8WVH0	158 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	RIN2	Q8WYP3	895 aa	Predicted RBP	6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	SEC62	Q99442	399 aa	Known RBP	6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	KAT14	Q9H8E8	782 aa		6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	HOOK1	Q9UJC3	728 aa	Known RBP	6.12	□□□□□ -1.43
RYR3-223	ENST00000636845	ATP7B	P35670	1465 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	USP42	Q9H9J4	1324 aa	Known RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	SOWAHD	A6NJG2	315 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	NDUFAB1	O14561	156 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	MYO1B	O43795	1136 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	PFKFB1	P16118	471 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	SARNP	P82979	210 aa	Known RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	MTF1	Q14872	753 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	CPLX2	Q6PUV4	134 aa	Known RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	B4GALNT4	Q76KP1	1039 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	CEP57	Q86XR8	500 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	NAPG	Q99747	312 aa	Predicted RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	CAPS2	Q9BXY5	557 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	VIPAS39	Q9H9C1	493 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	NCOA5	Q9HCD5	579 aa	Known RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	ODF2L	Q9ULJ1	636 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	SAMM50	Q9Y512	469 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	CLIC4	Q9Y696	253 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	CDHR2	Q9BYE9	1310 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	AKR1B15	C9JRZ8	316 aa	Predicted RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	PFKFB2	O60825	505 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	YEATS4	O95619	227 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	TFRC	P02786	760 aa	Known RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	EIF2S2	P20042	333 aa	Known RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	GPT	P24298	496 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	MARCKS	P29966	332 aa	Predicted RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	IRAK1	P51617	712 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	GNGT1	P63211	74 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	IDI1	Q13907	227 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	TAF7	Q15545	349 aa	Predicted RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	SLC35F6	Q8N357	371 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	STAG1	Q8WVM7	1258 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	RBM28	Q9NW13	759 aa	Known RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	ATP7A	Q04656	1500 aa		6.11	□□□□□ -1.43
RYR3-223	ENST00000636845	NPAT	Q14207	1427 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	CCDC189	A1A4V9	331 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	GOLGA6B	A6NDN3	693 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	MYO1F	O00160	1098 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	SYF2	O95926	243 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	GGCX	P38435	758 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	AARS	P49588	968 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	TEF	Q10587	303 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	PPFIA1	Q13136	1202 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	G3BP1	Q13283	466 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	BIRC2	Q13490	618 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	PNOC	Q13519	176 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	OTUD7B	Q6GQQ9	843 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	FMNL3	Q8IVF7	1028 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	NOA1	Q8NC60	698 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	MIEF2	Q96C03	454 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	C8orf76	Q96K31	380 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	PHAX	Q9H814	394 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	PA2G4	Q9UQ80	394 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	ADGRG1	Q9Y653	693 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	IFT172	Q9UG01	1749 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	PRPF6	O94906	941 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	CMA1	P23946	247 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	ARHGAP25	P42331	645 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	MTHFSD	Q2M296	383 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	RNF187	Q5TA31	235 aa	Predicted RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	TTC19	Q6DKK2	380 aa	Predicted RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	ZNF662	Q6ZS27	426 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	MICALCL	Q6ZW33	695 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	ARHGEF25	Q86VW2	580 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	PRPF38A	Q8NAV1	312 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	RUFY1	Q96T51	708 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	CDC5L	Q99459	802 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	HSD3B7	Q9H2F3	369 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	C19orf44	Q9H6X5	657 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	CD248	Q9HCU0	757 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	A1CF	Q9NQ94	594 aa	Known RBP	6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	POLR3E	Q9NVU0	708 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	HPCAL4	Q9UM19	191 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845	NFE2L3	Q9Y4A8	694 aa		6.1	□□□□□ -1.43
RYR3-223	ENST00000636845		A0A1B0GUA9	196 aa		6.09	□□□□□ -1.43
RYR3-223	ENST00000636845	PLEKHG3	A1L390	1219 aa		6.09	□□□□□ -1.43
RYR3-223	ENST00000636845	C21orf2	O43822	256 aa		6.09	□□□□□ -1.43
RYR3-223	ENST00000636845	TAF5L	O75529	589 aa		6.09	□□□□□ -1.43
RYR3-223	ENST00000636845	ATP2B2	Q01814	1243 aa		6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms