RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 RUFY2Q8WXA3 655 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 PRMT6Q96LA8 375 aaPredicted RBP12.8□□□□□ -0.36
CLN5-213ENST00000636681 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
CLN5-213ENST00000636681 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 EPS15P42566 896 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
CLN5-213ENST00000636681 CNOT7Q9UIV1 285 aaKnown RBP12.79□□□□□ -0.36
CLN5-213ENST00000636681 SLC4A4Q9Y6R1 1079 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 SLURP2P0DP57 97 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 TBC1D10BQ4KMP7 808 aaPredicted RBP12.79□□□□□ -0.36
CLN5-213ENST00000636681 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 DDX4Q9NQI0 724 aaKnown RBP12.79□□□□□ -0.36
CLN5-213ENST00000636681 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
CLN5-213ENST00000636681 LAMB1P07942 1786 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 RAD50Q92878 1312 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 DDX60LQ5H9U9 1706 aaKnown RBP12.78□□□□□ -0.36
CLN5-213ENST00000636681 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 GSTO1P78417 241 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 NFIAQ12857 509 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 LRRFIP1Q32MZ4 808 aaKnown RBP12.78□□□□□ -0.36
CLN5-213ENST00000636681 HHIPL2Q6UWX4 724 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 STK11IPQ8N1F8 1099 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 TRPM4Q8TD43 1214 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 TGFBRAP1Q8WUH2 860 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
CLN5-213ENST00000636681 TSHZ2Q9NRE2 1034 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
CLN5-213ENST00000636681 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
CLN5-213ENST00000636681 MYO3BQ8WXR4 1341 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 APPP05067 770 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 LDHCP07864 332 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 CYP2D6P10635 497 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 HAND2P61296 217 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 MAPKAPK5Q8IW41 473 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 ZFPM1Q8IX07 1006 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 RASEFQ8IZ41 740 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 GPC2Q8N158 579 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 MAP4K1Q92918 833 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 MYOZ2Q9NPC6 264 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 INCENPQ9NQS7 918 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 USP40Q9NVE5 1235 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 TACC3Q9Y6A5 838 aa12.77□□□□□ -0.36
CLN5-213ENST00000636681 FGAP02671 866 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 PPP4CP60510 307 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 PICALMQ13492 652 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 KIAA1211Q6ZU35 1233 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 TEX11Q8IYF3 940 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
CLN5-213ENST00000636681 SERPINA10Q9UK55 444 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 WDHD1O75717 1129 aaPredicted RBP12.76□□□□□ -0.37
CLN5-213ENST00000636681 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 HIRAP54198 1017 aaPredicted RBP12.76□□□□□ -0.37
CLN5-213ENST00000636681 ZNF280AP59817 542 aaPredicted RBP12.76□□□□□ -0.37
CLN5-213ENST00000636681 IFNL3Q8IZI9 196 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
CLN5-213ENST00000636681 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 NBPF3Q9H094 633 aa12.76□□□□□ -0.37
CLN5-213ENST00000636681 POTECB2RU33 542 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
CLN5-213ENST00000636681 WNT10BO00744 389 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 REC8O95072 547 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 TCP10Q12799 353 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 NECTIN1Q15223 517 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 DLGAP5Q15398 846 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 DLK2Q6UY11 383 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 TICAM2Q86XR7 235 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 CDAN1Q8IWY9 1227 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 OGFOD1Q8N543 542 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 DPF2Q92785 391 aa12.75□□□□□ -0.37
CLN5-213ENST00000636681 DCP1AQ9NPI6 582 aaPredicted RBP12.75□□□□□ -0.37
CLN5-213ENST00000636681 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
CLN5-213ENST00000636681 BAG3O95817 575 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 CYP21A2P08686 494 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 RPS12P25398 132 aaKnown RBP12.74□□□□□ -0.37
CLN5-213ENST00000636681 USP5P45974 858 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 HDLBPQ00341 1268 aaKnown RBP12.74□□□□□ -0.37
CLN5-213ENST00000636681 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 CREB3L3Q68CJ9 461 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 SLF2Q8IX21 1173 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 KIF2CQ99661 725 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 NOL10Q9BSC4 688 aaKnown RBP12.74□□□□□ -0.37
CLN5-213ENST00000636681 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
CLN5-213ENST00000636681 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 MYH8P13535 1937 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 FLT1P17948 1338 aa12.74□□□□□ -0.37
CLN5-213ENST00000636681 TCP10L2B9ZVM9 353 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms