RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TRANK1O15050 2925 aa2.04□□□□□ -2.08
SYNGAP1-216ENST00000636640 CHD9Q3L8U1 2897 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 RFX7Q2KHR2 1363 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 ATRNL1Q5VV63 1379 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 MYO3BQ8WXR4 1341 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 ADGRA2Q96PE1 1338 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 PNMA6EA0A0J9YXQ4 647 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 TESPA1A2RU30 521 aaPredicted RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 DDTLA6NHG4 134 aaPredicted RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 BTBD19C9JJ37 291 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 SMIM22K7EJ46 135 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 EYA2O00167 538 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 FKTNO75072 461 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 PDE8BO95263 885 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 CHGBP05060 677 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 RLBP1P12271 317 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 PRDX5P30044 214 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 FKBP1AP62942 108 aaKnown RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 CALD1Q05682 793 aaKnown RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 TCP10Q12799 353 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 TFCP2Q12800 502 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 VGLL4Q14135 290 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 UBE4AQ14139 1066 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 MTFR1Q15390 333 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 MAP3K11Q16584 847 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 CCDC57Q2TAC2 916 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 SLFNL1Q499Z3 407 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 NCBP3Q53F19 620 aaKnown RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 TAF7LQ5H9L4 462 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 METTL24Q5JXM2 366 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 MFSD14BQ5SR56 506 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 GPAT2Q6NUI2 795 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 CDC42EP5Q6NZY7 148 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 POTEEQ6S8J3 1075 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 TBC1D9Q6ZT07 1266 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZNF804AQ7Z570 1209 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 ADGRA1Q86SQ6 560 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 APOBEC3FQ8IUX4 373 aaKnown RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 MIER1Q8N108 512 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 OGFOD1Q8N543 542 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 SH3TC2Q8TF17 1288 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 CLUAP1Q96AJ1 413 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 OPTNQ96CV9 577 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 SHISA4Q96DD7 197 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 OTUD5Q96G74 571 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 C1orf115Q9H7X2 142 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 SAGE1Q9NXZ1 904 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 HDAC9Q9UKV0 1011 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 NOB1Q9ULX3 412 aaKnown RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 GABRQQ9UN88 632 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 DAGLAQ9Y4D2 1042 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 TRIM17Q9Y577 477 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 LRRFIP2Q9Y608 721 aaKnown RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 PTCH2Q9Y6C5 1203 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 NDUFB9Q9Y6M9 179 aa2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 RANBP2P49792 3224 aaKnown RBP2.03□□□□□ -2.08
SYNGAP1-216ENST00000636640 EYSQ5T1H1 3165 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 MROH5Q6ZUA9 1318 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 CCL15-CCL14A0A0B4J2E2 113 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 A0A1B0GUL7 405 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 MANSC4A6NHS7 340 aaPredicted RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 SPDYE5A6NIY4 337 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 PHF20L1A8MW92 1017 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 IRF6O14896 467 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 CA12O43570 354 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 WDHD1O75717 1129 aaPredicted RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 CYP2C8P10632 490 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 RGS3P49796 1198 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 RARSP54136 660 aaKnown RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 RHBDL3P58872 404 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 DYNLL1P63167 89 aaKnown RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 FKBP1BP68106 108 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 MAP3K9P80192 1104 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 TRIM32Q13049 653 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 RASGRF1Q13972 1273 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 TAF1CQ15572 869 aaPredicted RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 CCL15Q16663 113 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 ATP2B3Q16720 1220 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 SLC4A8Q2Y0W8 1093 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 CCDC102BQ68D86 513 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 FBXO46Q6PJ61 603 aaPredicted RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 C17orf99Q6UX52 265 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 ARMC9Q7Z3E5 817 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 ANKRD13AQ8IZ07 590 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 TMEM57Q8N5G2 664 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 XAGE2Q96GT9 111 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 TRIM47Q96LD4 638 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZDHHC15Q96MV8 337 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 WRNIP1Q96S55 665 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 CFHR5Q9BXR6 569 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 SNRKQ9NRH2 765 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 SMC4Q9NTJ3 1288 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 USP40Q9NVE5 1235 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 TLR7Q9NYK1 1049 aaKnown RBP2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 HMG20BQ9P0W2 317 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 CPA4Q9UI42 421 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 ZNF112Q9UJU3 913 aa2.02□□□□□ -2.09
SYNGAP1-216ENST00000636640 SERPINA10Q9UK55 444 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms