RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 SCRN1Q12765 414 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 ATP2B3Q16720 1220 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 ZSCAN25Q6NSZ9 544 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 CCDC129Q6ZRS4 1044 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 COPS6Q7L5N1 327 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 SEC62Q99442 399 aaKnown RBP7.32□□□□□ -1.24
GABRA1-213ENST00000636340 LLPHQ9BRT6 129 aaKnown RBP7.32□□□□□ -1.24
GABRA1-213ENST00000636340 DNAJC25Q9H1X3 360 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 ZSCAN16Q9H4T2 348 aaPredicted RBP7.32□□□□□ -1.24
GABRA1-213ENST00000636340 SLC52A2Q9HAB3 445 aa7.32□□□□□ -1.24
GABRA1-213ENST00000636340 PSDA5PKW4 1024 aaPredicted RBP7.31□□□□□ -1.24
GABRA1-213ENST00000636340 GOLGA6L4A6NEF3 574 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 CAVIN2O95810 425 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 MYL6BP14649 208 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 ZSCAN20P17040 1043 aaPredicted RBP7.31□□□□□ -1.24
GABRA1-213ENST00000636340 ZNF165P49910 485 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 CCDC144BQ3MJ40 725 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 MCMDC2Q4G0Z9 681 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 NAA16Q6N069 864 aaPredicted RBP7.31□□□□□ -1.24
GABRA1-213ENST00000636340 SARM1Q6SZW1 724 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 CCDC144CPQ8IYA2 1237 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 NSUN7Q8NE18 718 aaKnown RBP7.31□□□□□ -1.24
GABRA1-213ENST00000636340 CACTINQ8WUQ7 758 aaKnown RBP7.31□□□□□ -1.24
GABRA1-213ENST00000636340 DBNDD2Q9BQY9 259 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 AGXT2Q9BYV1 514 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 RCOR1Q9UKL0 485 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 NHSL1Q5SYE7 1610 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 MYH15Q9Y2K3 1946 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 ERBB3P21860 1342 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 EXOSC10Q01780 885 aaKnown RBP7.31□□□□□ -1.24
GABRA1-213ENST00000636340 KIF1AQ12756 1690 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 SNW1Q13573 536 aaKnown RBP7.31□□□□□ -1.24
GABRA1-213ENST00000636340 LAMA4Q16363 1823 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 SLF2Q8IX21 1173 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 ENGASEQ8NFI3 743 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 BICD2Q8TD16 824 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 SH3TC1Q8TE82 1336 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 RGPD5Q99666 1765 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 TRIM5Q9C035 493 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 GOLPH3LQ9H4A5 285 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 CFAP45Q9UL16 551 aa7.31□□□□□ -1.24
GABRA1-213ENST00000636340 GLI3P10071 1580 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 PALLDQ8WX93 1383 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 SALL1Q9NSC2 1324 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 PHKG2P15735 406 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 ATP6V1AP38606 617 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 CHAF1AQ13111 956 aaPredicted RBP7.3□□□□□ -1.24
GABRA1-213ENST00000636340 SEMA3FQ13275 785 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 SYCP1Q15431 976 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 UTP14CQ5TAP6 766 aaKnown RBP7.3□□□□□ -1.24
GABRA1-213ENST00000636340 ANKRD13DQ6ZTN6 518 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 C11orf57Q6ZUT1 292 aaPredicted RBP7.3□□□□□ -1.24
GABRA1-213ENST00000636340 FAM174AQ8TBP5 190 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 ZNF496Q96IT1 587 aaPredicted RBP7.3□□□□□ -1.24
GABRA1-213ENST00000636340 USTQ9Y2C2 406 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 USP16Q9Y5T5 823 aa7.3□□□□□ -1.24
GABRA1-213ENST00000636340 SMTNL1A8MU46 457 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 DMTNQ08495 405 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 NCBP1Q09161 790 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 FAM98CQ17RN3 349 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 PHLDB3Q6NSJ2 640 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 DHX32Q7L7V1 743 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 PDCL2Q8N4E4 241 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 KBTBD3Q8NAB2 608 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 NFATC2IPQ8NCF5 419 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 MARVELD3Q96A59 401 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 MRFAP1L1Q96HT8 127 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 LRRC2Q9BYS8 371 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 COL16A1Q07092 1604 aaPredicted RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 ABCC6O95255 1503 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 ARFGEF2Q9Y6D5 1785 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 PTPDC1A2A3K4 754 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 H3BQV1 296 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 CTAGE5O15320 804 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 IGSF3O75054 1194 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 HMGB1P09429 215 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 RBM6P78332 1123 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 FOXO4P98177 505 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 SLFNL1Q499Z3 407 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 CRTC2Q53ET0 693 aaPredicted RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 IFFO2Q5TF58 517 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 DDX46Q7L014 1031 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 UBE3BQ7Z3V4 1068 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 TICAM2Q86XR7 235 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 CCAR1Q8IX12 1150 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 DNAJC2Q99543 621 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 FTOQ9C0B1 505 aaKnown RBP eCLIP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 SCUBE2Q9NQ36 999 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 PRDM10Q9NQV6 1147 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 CLIP2Q9UDT6 1046 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 MEGF6O75095 1541 aa7.29□□□□□ -1.24
GABRA1-213ENST00000636340 AFDNP55196 1824 aaKnown RBP7.29□□□□□ -1.24
GABRA1-213ENST00000636340 SOS2Q07890 1332 aaPredicted RBP7.28□□□□□ -1.24
GABRA1-213ENST00000636340 SNRPA1P09661 255 aaKnown RBP7.28□□□□□ -1.24
GABRA1-213ENST00000636340 HSP90B1P14625 803 aaKnown RBP7.28□□□□□ -1.24
GABRA1-213ENST00000636340 STX1AQ16623 288 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms