RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TUBB4BP68371 445 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 PNOCQ13519 176 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 NEK11Q8NG66 645 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 TMEM232C9JQI7 657 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 EYA2O00167 538 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 CIAO1O76071 339 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 PTPAQ15257 358 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 SPECC1LQ69YQ0 1117 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 KRBA2Q6ZNG9 492 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 VPS37DQ86XT2 251 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 FAM177A1Q8N128 213 aaPredicted RBP17■□□□□ 0.31
CACNA1A-220ENST00000635988 CNNM3Q8NE01 707 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 SMARCE1Q969G3 411 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 PARD6BQ9BYG5 372 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 ATG3Q9NT62 314 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 ZMYM6O95789 1325 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 TXLNAP40222 546 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 IPO4Q8TEX9 1081 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 RAPGEF4Q8WZA2 1011 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 WDR24Q96S15 920 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 FUT8Q9BYC5 575 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 A0A1B0GUL7 405 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 FGAP02671 866 aa16.99■□□□□ 0.31
CACNA1A-220ENST00000635988 KDM6AO15550 1401 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 CPDO75976 1380 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 HAND2P61296 217 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 ST5P78524 1137 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 TUBB2AQ13885 445 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 PDILTQ8N807 584 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 KIFC2Q96AC6 838 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 TUBB2BQ9BVA1 445 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 GJB4Q9NTQ9 266 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 PCDHA5Q9Y5H7 936 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 ZNF213O14771 459 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 ANTXR2P58335 489 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 ZSCAN26Q16670 478 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 WASHC4Q2M389 1173 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 TC2NQ8N9U0 490 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 MLKLQ8NB16 471 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 INTS13Q9NVM9 706 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 FEZ2Q9UHY8 353 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 KCNH3Q9ULD8 1083 aa16.98■□□□□ 0.31
CACNA1A-220ENST00000635988 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 ARFGEF2Q9Y6D5 1785 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 TRDNQ13061 729 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 KRT40Q6A162 431 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 GOLGA5Q8TBA6 731 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 ENOX1Q8TC92 643 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 HNRNPLLQ8WVV9 542 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 MAP3K14Q99558 947 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 PHKG2P15735 406 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 GOLGA8FQ08AF8 430 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 GOLGA8DPQ0D2H9 430 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 TRIM29Q14134 588 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 APPBP2Q92624 585 aa16.97■□□□□ 0.31
CACNA1A-220ENST00000635988 CCDC175P0C221 793 aa16.96■□□□□ 0.31
CACNA1A-220ENST00000635988 LONRF2Q1L5Z9 754 aa16.96■□□□□ 0.31
CACNA1A-220ENST00000635988 LONRF3Q496Y0 759 aa16.96■□□□□ 0.31
CACNA1A-220ENST00000635988 CCDC34Q96HJ3 373 aa16.96■□□□□ 0.31
CACNA1A-220ENST00000635988 ZCCHC17Q9NP64 241 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-220ENST00000635988 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-220ENST00000635988 ANGEL1Q9UNK9 670 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-220ENST00000635988 MAP2K7O14733 419 aa16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 FOXP2O15409 715 aa16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 ZNF18P17022 549 aa16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 METAP2P50579 478 aaKnown RBP eCLIP16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 TRIML1Q8N9V2 468 aa16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 EPC1Q9H2F5 836 aa16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.3
CACNA1A-220ENST00000635988 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 TOGARAM2Q6ZUX3 1019 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 SRGAP1Q7Z6B7 1085 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 CEP112Q8N8E3 955 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 KRI1Q8N9T8 703 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 DHX58Q96C10 678 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 AKAP2Q9Y2D5 859 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 TTC39AQ5SRH9 613 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 FOXP4Q8IVH2 680 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 PANX2Q96RD6 677 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 ADAM21Q9UKJ8 722 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 NFE2L3Q9Y4A8 694 aa16.95■□□□□ 0.3
CACNA1A-220ENST00000635988 DDX60Q8IY21 1712 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 NWD2Q9ULI1 1742 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 ERLIN1O75477 346 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 CHMP4BP1P59074 171 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 MDM2Q00987 491 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms