RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 SHTN1A0MZ66 631 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 GLTPD2A6NH11 291 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 H7C1D1 291 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 REC8O95072 547 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 LMOD1P29536 600 aaPredicted RBP21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 DLGAP5Q15398 846 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 BACH2Q9BYV9 841 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 MYOZ2Q9NPC6 264 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 GPRC5DQ9NZD1 345 aa21.18■□□□□ 0.98
SPTAN1-217ENST00000629089 PLCG2P16885 1265 aa21.17■□□□□ 0.98
SPTAN1-217ENST00000629089 ZNF280AP59817 542 aaPredicted RBP21.17■□□□□ 0.98
SPTAN1-217ENST00000629089 PPP4CP60510 307 aa21.17■□□□□ 0.98
SPTAN1-217ENST00000629089 STRBPQ96SI9 672 aaKnown RBP21.17■□□□□ 0.98
SPTAN1-217ENST00000629089 PCDHAC2Q9Y5I4 1007 aa21.17■□□□□ 0.98
SPTAN1-217ENST00000629089 GNAT2P19087 354 aa21.16■□□□□ 0.98
SPTAN1-217ENST00000629089 RBM26Q5T8P6 1007 aaKnown RBP21.16■□□□□ 0.98
SPTAN1-217ENST00000629089 APOBEC3HQ6NTF7 200 aaKnown RBP21.16■□□□□ 0.98
SPTAN1-217ENST00000629089 SLC4A4Q9Y6R1 1079 aa21.16■□□□□ 0.98
SPTAN1-217ENST00000629089 SEC24BO95487 1268 aa21.15■□□□□ 0.98
SPTAN1-217ENST00000629089 SH3RF3Q8TEJ3 882 aaPredicted RBP21.15■□□□□ 0.98
SPTAN1-217ENST00000629089 CRNKL1Q9BZJ0 848 aaKnown RBP21.15■□□□□ 0.98
SPTAN1-217ENST00000629089 USP40Q9NVE5 1235 aa21.15■□□□□ 0.98
SPTAN1-217ENST00000629089 SPDYE2BA6NHP3 402 aa21.14■□□□□ 0.98
SPTAN1-217ENST00000629089 APPP05067 770 aa21.14■□□□□ 0.98
SPTAN1-217ENST00000629089 SPDYE6P0CI01 402 aa21.14■□□□□ 0.98
SPTAN1-217ENST00000629089 SAMD7Q7Z3H4 446 aa21.14■□□□□ 0.98
SPTAN1-217ENST00000629089 MTMR14Q8NCE2 650 aa21.14■□□□□ 0.98
SPTAN1-217ENST00000629089 PRMT6Q96LA8 375 aaPredicted RBP21.14■□□□□ 0.98
SPTAN1-217ENST00000629089 PRKAB2O43741 272 aa21.14■□□□□ 0.97
SPTAN1-217ENST00000629089 HSPD1P10809 573 aaKnown RBP21.14■□□□□ 0.97
SPTAN1-217ENST00000629089 EPS15P42566 896 aa21.14■□□□□ 0.97
SPTAN1-217ENST00000629089 KIF4BQ2VIQ3 1234 aa21.14■□□□□ 0.97
SPTAN1-217ENST00000629089 TBC1D10BQ4KMP7 808 aaPredicted RBP21.14■□□□□ 0.97
SPTAN1-217ENST00000629089 VPS53Q5VIR6 699 aa21.14■□□□□ 0.97
SPTAN1-217ENST00000629089 TEX11Q8IYF3 940 aa21.14■□□□□ 0.97
SPTAN1-217ENST00000629089 PATL2C9JE40 543 aaKnown RBP21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 MYO1BO43795 1136 aa21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 USP5P45974 858 aa21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 RHBDL3P58872 404 aa21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 PTH1RQ03431 593 aa21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 CDC42EP5Q6NZY7 148 aa21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 SDR42E1Q8WUS8 393 aa21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 L3MBTL3Q96JM7 780 aaPredicted RBP21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 LSG1Q9H089 658 aaKnown RBP21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 TDRD3Q9H7E2 651 aaKnown RBP21.13■□□□□ 0.97
SPTAN1-217ENST00000629089 WNT10BO00744 389 aa21.12■□□□□ 0.97
SPTAN1-217ENST00000629089 EGFRP00533 1210 aa21.12■□□□□ 0.97
SPTAN1-217ENST00000629089 DSCC1Q9BVC3 393 aa21.12■□□□□ 0.97
SPTAN1-217ENST00000629089 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
SPTAN1-217ENST00000629089 TGFBRAP1Q8WUH2 860 aa21.11■□□□□ 0.97
SPTAN1-217ENST00000629089 DDRGK1Q96HY6 314 aa21.11■□□□□ 0.97
SPTAN1-217ENST00000629089 NACAP1Q9BZK3 213 aa21.11■□□□□ 0.97
SPTAN1-217ENST00000629089 ADARB2Q9NS39 739 aaKnown RBP21.11■□□□□ 0.97
SPTAN1-217ENST00000629089 TMOD2Q9NZR1 351 aa21.11■□□□□ 0.97
SPTAN1-217ENST00000629089 HACL1Q9UJ83 578 aa21.11■□□□□ 0.97
SPTAN1-217ENST00000629089 RPAP1Q9BWH6 1393 aaPredicted RBP21.1■□□□□ 0.97
SPTAN1-217ENST00000629089 GSG1L2A8MUP6 293 aa21.1■□□□□ 0.97
SPTAN1-217ENST00000629089 NBPF9Q3BBW0 867 aa21.1■□□□□ 0.97
SPTAN1-217ENST00000629089 ZBED3Q96IU2 234 aaPredicted RBP21.1■□□□□ 0.97
SPTAN1-217ENST00000629089 ATP8A2Q9NTI2 1148 aa21.1■□□□□ 0.97
SPTAN1-217ENST00000629089 ECM29Q5VYK3 1845 aa21.1■□□□□ 0.97
SPTAN1-217ENST00000629089 CLRN2A0PK11 232 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 IQCA1LA6NCM1 817 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 TDO2P48775 406 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 PICALMQ13492 652 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 IFNL3Q8IZI9 196 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 TRPM4Q8TD43 1214 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 MAP4K1Q92918 833 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 NAPBQ9H115 298 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 FOXP2O15409 715 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 CACNB3P54284 484 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 MAPKAPK5Q8IW41 473 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 USP26Q9BXU7 913 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 VEZTQ9HBM0 779 aa21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 EPB41L4AQ9HCS5 686 aaPredicted RBP21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 ZNF70Q9UC06 446 aaPredicted RBP21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 U3KPZ7 1027 aaPredicted RBP21.09■□□□□ 0.97
SPTAN1-217ENST00000629089 CDK5RAP2Q96SN8 1893 aa21.08■□□□□ 0.97
SPTAN1-217ENST00000629089 WDR90Q96KV7 1748 aa21.08■□□□□ 0.96
SPTAN1-217ENST00000629089 EPB41L2O43491 1005 aaKnown RBP21.08■□□□□ 0.96
SPTAN1-217ENST00000629089 WDHD1O75717 1129 aaPredicted RBP21.08■□□□□ 0.96
SPTAN1-217ENST00000629089 SPDYE2Q495Y8 402 aa21.08■□□□□ 0.96
SPTAN1-217ENST00000629089 DCP1AQ9NPI6 582 aaPredicted RBP21.08■□□□□ 0.96
SPTAN1-217ENST00000629089 RBM8AQ9Y5S9 174 aaKnown RBP21.08■□□□□ 0.96
SPTAN1-217ENST00000629089 SCN4AP35499 1836 aa21.07■□□□□ 0.96
SPTAN1-217ENST00000629089 FLT1P17948 1338 aa21.07■□□□□ 0.96
SPTAN1-217ENST00000629089 FGAP02671 866 aa21.07■□□□□ 0.96
SPTAN1-217ENST00000629089 EPHX2P34913 555 aa21.07■□□□□ 0.96
SPTAN1-217ENST00000629089 GIMAP6Q6P9H5 292 aa21.07■□□□□ 0.96
SPTAN1-217ENST00000629089 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
SPTAN1-217ENST00000629089 FOCADQ5VW36 1801 aa21.07■□□□□ 0.96
SPTAN1-217ENST00000629089 MCCP23508 829 aa21.06■□□□□ 0.96
SPTAN1-217ENST00000629089 NFIAQ12857 509 aa21.06■□□□□ 0.96
SPTAN1-217ENST00000629089 ALX1Q15699 326 aa21.06■□□□□ 0.96
SPTAN1-217ENST00000629089 IDI2Q9BXS1 227 aa21.06■□□□□ 0.96
SPTAN1-217ENST00000629089 MCM9Q9NXL9 1143 aa21.06■□□□□ 0.96
SPTAN1-217ENST00000629089 NAV1Q8NEY1 1877 aa21.06■□□□□ 0.96
SPTAN1-217ENST00000629089 TCP10L2B9ZVM9 353 aa21.05■□□□□ 0.96
SPTAN1-217ENST00000629089 TCP10Q12799 353 aa21.05■□□□□ 0.96
SPTAN1-217ENST00000629089 DDX4Q9NQI0 724 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms