RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 MAP3K9P80192 1104 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 TUBB2AQ13885 445 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 BRD3Q15059 726 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 HDGFL1Q5TGJ6 251 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 CC2D1AQ6P1N0 951 aaPredicted RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 RSRC2Q7L4I2 434 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 AOPEPQ8N6M6 819 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 MNS1Q8NEH6 495 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 HNRNPLLQ8WVV9 542 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 MRPS27Q92552 414 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 RABGGTAQ92696 567 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 TUBB2BQ9BVA1 445 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 TRIM34Q9BYJ4 488 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 XPO4Q9C0E2 1151 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 GOLPH3LQ9H4A5 285 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 RTEL1Q9NZ71 1219 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 KIAA1468Q9P260 1216 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 UTYO14607 1347 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 CHD4Q14839 1912 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 COL15A1P39059 1388 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 WDR17Q8IZU2 1322 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 MYO1CO00159 1063 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 YEATS4O95619 227 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 IVLP07476 585 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 OAS2P29728 719 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 CASQ1P31415 396 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 ACTN2P35609 894 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 NOP2P46087 812 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 HSPA2P54652 639 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 INSM1Q01101 510 aaPredicted RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 OS9Q13438 667 aaPredicted RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 SMC1AQ14683 1233 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 NCAPHQ15003 741 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 TAF7LQ5H9L4 462 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 C1orf141Q5JVX7 400 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 KRBA2Q6ZNG9 492 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 TMC6Q7Z403 805 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 SRLQ86TD4 932 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 FBXL16Q8N461 479 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 FSIP1Q8NA03 581 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 NFATC2IPQ8NCF5 419 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 SMARCE1Q969G3 411 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 USP28Q96RU2 1077 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 PHAXQ9H814 394 aaKnown RBP4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 BRMS1Q9HCU9 246 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 ATG3Q9NT62 314 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 SBF2Q86WG5 1849 aa4.82□□□□□ -1.64
PTP4A1-205ENST00000626021 SALL1Q9NSC2 1324 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 CCDC151A5D8V7 595 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 ARHGAP6O43182 974 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 SASH1O94885 1247 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 FANCCQ00597 558 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 TEFQ10587 303 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 SCRN1Q12765 414 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 Q6ZUG5 572 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 ELOA2Q8IYF1 753 aaPredicted RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 GOLGA6L1Q8N7Z2 621 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 NSUN7Q8NE18 718 aaKnown RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 DDX11Q96FC9 970 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 ZNF274Q96GC6 653 aaPredicted RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 FAM227BQ96M60 508 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 CARD6Q9BX69 1037 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 FUT8Q9BYC5 575 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 LGR6Q9HBX8 967 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 ARFGAP3Q9NP61 516 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 WDR70Q9NW82 654 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 IFNKQ9P0W0 207 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 PARP3Q9Y6F1 533 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 TAF1LQ8IZX4 1826 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 LRP5O75197 1615 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 ZNF335Q9H4Z2 1342 aaPredicted RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 DOCK2Q92608 1830 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 A0A0D9SFI3 127 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 DHX16O60231 1041 aaKnown RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 TBC1D12O60347 775 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 JAK2O60674 1132 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 SASH3O75995 380 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 URI1O94763 535 aaPredicted RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 TUBBP07437 444 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 PHKG2P15735 406 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 TATP17735 454 aaPredicted RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 EVCP57679 992 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 IRX3P78415 501 aaPredicted RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 ST5P78524 1137 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 G3BP1Q13283 466 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 NOM1Q5C9Z4 860 aaKnown RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 DMRTA1Q5VZB9 504 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 HOMER1Q86YM7 354 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 LRRN4CLQ8ND94 238 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 NEK11Q8NG66 645 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 KCNG4Q8TDN1 519 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 GPHNQ9NQX3 736 aaPredicted RBP4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 POLR3EQ9NVU0 708 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 TUBE1Q9UJT0 475 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 ADAM21Q9UKJ8 722 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 PCDHA7Q9UN72 937 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 MRFAP1Q9Y605 127 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 SCN7AQ01118 1682 aa4.81□□□□□ -1.64
PTP4A1-205ENST00000626021 NEDD4P46934 1319 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms