RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ERICH3Q5RHP9 1530 aa5.49□□□□□ -1.53
CDKL5-208ENST00000624953 LDHBP07195 334 aaKnown RBP5.49□□□□□ -1.53
CDKL5-208ENST00000624953 MAPK8P45983 427 aa5.49□□□□□ -1.53
CDKL5-208ENST00000624953 FAM117BQ6P1L5 589 aa5.49□□□□□ -1.53
CDKL5-208ENST00000624953 ARMC10Q8N2F6 343 aa5.49□□□□□ -1.53
CDKL5-208ENST00000624953 SMG8Q8ND04 991 aaKnown RBP5.49□□□□□ -1.53
CDKL5-208ENST00000624953 GSX1Q9H4S2 264 aaPredicted RBP5.49□□□□□ -1.53
CDKL5-208ENST00000624953 ZFYVE1Q9HBF4 777 aa5.49□□□□□ -1.53
CDKL5-208ENST00000624953 RNF19AQ9NV58 838 aa5.49□□□□□ -1.53
CDKL5-208ENST00000624953 NLRP2Q9NX02 1062 aa5.49□□□□□ -1.53
CDKL5-208ENST00000624953 PRG4Q92954 1404 aaPredicted RBP5.48□□□□□ -1.53
CDKL5-208ENST00000624953 MAP3K4Q9Y6R4 1608 aa5.48□□□□□ -1.53
CDKL5-208ENST00000624953 ALX3O95076 343 aa5.48□□□□□ -1.53
CDKL5-208ENST00000624953 IREB2P48200 963 aaKnown RBP5.48□□□□□ -1.53
CDKL5-208ENST00000624953 DAB2P98082 770 aa5.48□□□□□ -1.53
CDKL5-208ENST00000624953 EAPPQ56P03 285 aaPredicted RBP5.48□□□□□ -1.53
CDKL5-208ENST00000624953 AGGF1Q8N302 714 aaeCLIP5.48□□□□□ -1.53
CDKL5-208ENST00000624953 NECAB3Q96P71 396 aaPredicted RBP5.48□□□□□ -1.53
CDKL5-208ENST00000624953 KRTAP4-12Q9BQ66 201 aa5.48□□□□□ -1.53
CDKL5-208ENST00000624953 FHAD1B1AJZ9 1412 aa5.48□□□□□ -1.53
CDKL5-208ENST00000624953 ADGRL1O94910 1474 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 ENC1O14682 589 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 GADD45BO75293 160 aaPredicted RBP5.47□□□□□ -1.53
CDKL5-208ENST00000624953 GSTT1P30711 240 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 FGD1P98174 961 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 ZNF252P-AS1Q0IIN9 211 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 UVSSAQ2YD98 709 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 ARTNQ5T4W7 220 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.47□□□□□ -1.53
CDKL5-208ENST00000624953 ACAD11Q709F0 780 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 TMC4Q7Z404 712 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 ZFP64Q9NPA5 681 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 FAM8A1Q9UBU6 413 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 USP21Q9UK80 565 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 PCDHGC5Q9Y5F6 944 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 AK5Q9Y6K8 562 aa5.47□□□□□ -1.53
CDKL5-208ENST00000624953 ECEL1O95672 775 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 CTSHP09668 335 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 CDC25BP30305 580 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 ARL4DP49703 201 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 FCGRTP55899 365 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 ATP2B2Q01814 1243 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 TAGLNQ01995 201 aaKnown RBP5.46□□□□□ -1.54
CDKL5-208ENST00000624953 AP3B2Q13367 1082 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 DUOXA2Q1HG44 320 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 ANKRD34AQ69YU3 496 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 STK35Q8TDR2 534 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 DUSP9Q99956 384 aaKnown RBP5.46□□□□□ -1.54
CDKL5-208ENST00000624953 RNF208Q9H0X6 261 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 SPG7Q9UQ90 795 aa5.46□□□□□ -1.54
CDKL5-208ENST00000624953 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
CDKL5-208ENST00000624953 ABCC2Q92887 1545 aa5.45□□□□□ -1.54
CDKL5-208ENST00000624953 NLRP12P59046 1061 aa5.45□□□□□ -1.54
CDKL5-208ENST00000624953 SLC7A3Q8WY07 619 aa5.45□□□□□ -1.54
CDKL5-208ENST00000624953 KRT82Q9NSB4 513 aa5.45□□□□□ -1.54
CDKL5-208ENST00000624953 GLI2P10070 1586 aa5.45□□□□□ -1.54
CDKL5-208ENST00000624953 FAM177BA6PVY3 158 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 CYP11A1P05108 521 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 USP17L7P0C7H9 530 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 BMP6P22004 513 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 MAOBP27338 520 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 PREPP48147 710 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 GSTM4Q03013 218 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 TRIM26Q12899 539 aaPredicted RBP5.44□□□□□ -1.54
CDKL5-208ENST00000624953 MRPL58Q14197 206 aaKnown RBP5.44□□□□□ -1.54
CDKL5-208ENST00000624953 EXOSC6Q5RKV6 272 aaKnown RBP5.44□□□□□ -1.54
CDKL5-208ENST00000624953 LDLRAD1Q5T700 205 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 RASIP1Q5U651 963 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 SCARA3Q6AZY7 606 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 DTHD1Q6ZMT9 781 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 PRR23CQ6ZRP0 262 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 MYRFLQ96LU7 910 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 RUSC1Q9BVN2 902 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 TMEM39AQ9NV64 488 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 PARP2Q9UGN5 583 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 HIF3AQ9Y2N7 669 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 KIF21BO75037 1637 aa5.44□□□□□ -1.54
CDKL5-208ENST00000624953 WRNQ14191 1432 aaPredicted RBP eCLIP5.43□□□□□ -1.54
CDKL5-208ENST00000624953 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
CDKL5-208ENST00000624953 ZNF862O60290 1169 aa5.43□□□□□ -1.54
CDKL5-208ENST00000624953 NME2P22392 152 aa5.43□□□□□ -1.54
CDKL5-208ENST00000624953 ST13P50502 369 aaKnown RBP5.43□□□□□ -1.54
CDKL5-208ENST00000624953 POU4F3Q15319 338 aa5.43□□□□□ -1.54
CDKL5-208ENST00000624953 KIF4BQ2VIQ3 1234 aa5.43□□□□□ -1.54
CDKL5-208ENST00000624953 C2CD4AQ8NCU7 369 aaPredicted RBP5.43□□□□□ -1.54
CDKL5-208ENST00000624953 EZH1Q92800 747 aaPredicted RBP5.43□□□□□ -1.54
CDKL5-208ENST00000624953 WDR18Q9BV38 432 aa5.43□□□□□ -1.54
CDKL5-208ENST00000624953 CEP41Q9BYV8 373 aa5.43□□□□□ -1.54
CDKL5-208ENST00000624953 ZCCHC11Q5TAX3 1644 aaKnown RBP5.43□□□□□ -1.54
CDKL5-208ENST00000624953 USP31Q70CQ4 1352 aa5.42□□□□□ -1.54
CDKL5-208ENST00000624953 PAGE1O75459 146 aa5.42□□□□□ -1.54
CDKL5-208ENST00000624953 GSTP1P09211 210 aaKnown RBP5.42□□□□□ -1.54
CDKL5-208ENST00000624953 EIF4BP23588 611 aaKnown RBP5.42□□□□□ -1.54
CDKL5-208ENST00000624953 TMCO4Q5TGY1 634 aa5.42□□□□□ -1.54
CDKL5-208ENST00000624953 NBPF11Q86T75 865 aa5.42□□□□□ -1.54
CDKL5-208ENST00000624953 SLC51AQ86UW1 340 aa5.42□□□□□ -1.54
CDKL5-208ENST00000624953 FAM20CQ8IXL6 584 aa5.42□□□□□ -1.54
CDKL5-208ENST00000624953 TP53INP1Q96A56 240 aa5.42□□□□□ -1.54
CDKL5-208ENST00000624953 CEP44Q9C0F1 390 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms