RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 ZNF252P-AS1Q0IIN9 211 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 TRAPPC3LQ5T215 181 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 MPRIPQ6WCQ1 1025 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 PLVAPQ9BX97 442 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 MKL2Q9ULH7 1088 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 BIVM-ERCC5R4GMW8 1640 aa6.17□□□□□ -1.42
ATRX-209ENST00000623242 TDRD9Q8NDG6 1382 aaKnown RBP6.17□□□□□ -1.42
ATRX-209ENST00000623242 KIF27Q86VH2 1401 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 DLGAP3O95886 979 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 PF4P02776 101 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 FAM117BQ6P1L5 589 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 FBXO11Q86XK2 927 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 RELL1Q8IUW5 271 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 ZNF654Q8IZM8 581 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 FMR1NBQ8N0W7 255 aaPredicted RBP6.16□□□□□ -1.42
ATRX-209ENST00000623242 TINF2Q9BSI4 451 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 KCNQ5Q9NR82 932 aa6.16□□□□□ -1.42
ATRX-209ENST00000623242 DLL1O00548 723 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 GNB5O14775 395 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 GSTP1P09211 210 aaKnown RBP6.15□□□□□ -1.42
ATRX-209ENST00000623242 RLBP1P12271 317 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 SELPP16109 830 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 NLRP12P59046 1061 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 RPS26P62854 115 aaKnown RBP6.15□□□□□ -1.42
ATRX-209ENST00000623242 FAM160A1Q05DH4 1040 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 PTPN11Q06124 597 aaPredicted RBP6.15□□□□□ -1.42
ATRX-209ENST00000623242 AP3B2Q13367 1082 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 CAMK2GQ13555 558 aaPredicted RBP6.15□□□□□ -1.42
ATRX-209ENST00000623242 SUZ12Q15022 739 aaKnown RBP6.15□□□□□ -1.42
ATRX-209ENST00000623242 FBXL19Q6PCT2 694 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 ALYREFQ86V81 257 aaKnown RBP6.15□□□□□ -1.42
ATRX-209ENST00000623242 DTWD1Q8N5C7 304 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 KLHL23Q8NBE8 558 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 GAL3ST3Q96A11 431 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 DCAF5Q96JK2 942 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 C8orf37Q96NL8 207 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 CCSER2Q9H7U1 834 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 CACNA2D2Q9NY47 1150 aa6.15□□□□□ -1.42
ATRX-209ENST00000623242 LOC100289279A0A1B0GTE1 492 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 WISP1O95388 367 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 MAOBP27338 520 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 CD68P34810 354 aaPredicted RBP6.14□□□□□ -1.43
ATRX-209ENST00000623242 EIF4A3P38919 411 aaKnown RBP6.14□□□□□ -1.43
ATRX-209ENST00000623242 ARL4DP49703 201 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 ZC3H6P61129 1189 aaKnown RBP6.14□□□□□ -1.43
ATRX-209ENST00000623242 LMNB2Q03252 620 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 PAK2Q13177 524 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 PWP1Q13610 501 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 SEPT6Q14141 434 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 NAALADL2Q58DX5 795 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 MAP4K3Q8IVH8 894 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 UBASH3BQ8TF42 649 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 ZC3H12CQ9C0D7 883 aaKnown RBP6.14□□□□□ -1.43
ATRX-209ENST00000623242 CCDC86Q9H6F5 360 aaKnown RBP6.14□□□□□ -1.43
ATRX-209ENST00000623242 CBX8Q9HC52 389 aa6.14□□□□□ -1.43
ATRX-209ENST00000623242 AQRO60306 1485 aaKnown RBP eCLIP6.14□□□□□ -1.43
ATRX-209ENST00000623242 GREM1O60565 184 aa6.13□□□□□ -1.43
ATRX-209ENST00000623242 POU4F3Q15319 338 aa6.13□□□□□ -1.43
ATRX-209ENST00000623242 PLA2G4EQ3MJ16 856 aa6.13□□□□□ -1.43
ATRX-209ENST00000623242 LLGL2Q6P1M3 1020 aa6.13□□□□□ -1.43
ATRX-209ENST00000623242 BNC2Q6ZN30 1099 aaPredicted RBP6.13□□□□□ -1.43
ATRX-209ENST00000623242 ZNF296Q8WUU4 475 aaPredicted RBP6.13□□□□□ -1.43
ATRX-209ENST00000623242 EAF1Q96JC9 268 aaPredicted RBP6.13□□□□□ -1.43
ATRX-209ENST00000623242 CYP8B1Q9UNU6 501 aa6.13□□□□□ -1.43
ATRX-209ENST00000623242 GAPVD1Q14C86 1478 aa6.13□□□□□ -1.43
ATRX-209ENST00000623242 ABCA10Q8WWZ4 1543 aa6.13□□□□□ -1.43
ATRX-209ENST00000623242 ZNF608Q9ULD9 1512 aaPredicted RBP6.13□□□□□ -1.43
ATRX-209ENST00000623242 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 MSTNO14793 375 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 ZNF862O60290 1169 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 F13A1P00488 732 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 CYP11A1P05108 521 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 COL8A1P27658 744 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 CRKP46108 304 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 CDK8P49336 464 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 RAC1P63000 192 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 MAP1SQ66K74 1059 aaPredicted RBP6.12□□□□□ -1.43
ATRX-209ENST00000623242 TRIM42Q8IWZ5 723 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 FBXO27Q8NI29 283 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 DDX54Q8TDD1 881 aaKnown RBP6.12□□□□□ -1.43
ATRX-209ENST00000623242 GPBAR1Q8TDU6 330 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 KCNB2Q92953 911 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 WDR89Q96FK6 387 aaPredicted RBP6.12□□□□□ -1.43
ATRX-209ENST00000623242 SPON2Q9BUD6 331 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 USP26Q9BXU7 913 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 EMILIN2Q9BXX0 1053 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 KRTAP4-6Q9BYQ5 205 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 CAPN10Q9HC96 672 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 SAMM50Q9Y512 469 aa6.12□□□□□ -1.43
ATRX-209ENST00000623242 EEA1Q15075 1411 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 FAM221AA4D161 298 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 PIK3R2O00459 728 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 TRIM37O94972 964 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 GJA8P48165 433 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 LRRC14Q15048 493 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 SHISA2Q6UWI4 295 aa6.11□□□□□ -1.43
ATRX-209ENST00000623242 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.11□□□□□ -1.43
ATRX-209ENST00000623242 KIAA1211Q6ZU35 1233 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms