RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 GIMAP6Q6P9H5 292 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 KRT23Q9C075 422 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
EPB42-210ENST00000622454 ESPNB1AK53 854 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 SEMA3EO15041 775 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 LIG1P18858 919 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 MFSD6Q6ZSS7 791 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 IGDCC4Q8TDY8 1250 aa16.35■□□□□ 0.21
EPB42-210ENST00000622454 ZNF396Q96N95 335 aaPredicted RBP16.35■□□□□ 0.21
EPB42-210ENST00000622454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
EPB42-210ENST00000622454 NPHP1O15259 732 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 METAP2P50579 478 aaKnown RBP eCLIP16.34■□□□□ 0.21
EPB42-210ENST00000622454 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 UVSSAQ2YD98 709 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 SLC27A3Q5K4L6 730 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 FBXO33Q7Z6M2 555 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 SGMS1Q86VZ5 419 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 PGBD1Q96JS3 809 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 C8orf76Q96K31 380 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 FUCA2Q9BTY2 467 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 KDM4AO75164 1064 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 LIFRP42702 1097 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 STAG1Q8WVM7 1258 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 DDX19AQ9NUU7 478 aaKnown RBP16.34■□□□□ 0.21
EPB42-210ENST00000622454 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
EPB42-210ENST00000622454 CDKL5O76039 1030 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 FBXO18Q8NFZ0 1043 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 BICD2Q8TD16 824 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 LY9Q9HBG7 655 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 INCENPQ9NQS7 918 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 RCOR1Q9UKL0 485 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
EPB42-210ENST00000622454 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
EPB42-210ENST00000622454 ADRA2BP18089 450 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 CEBPZQ03701 1054 aaKnown RBP16.33■□□□□ 0.2
EPB42-210ENST00000622454 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 CPLX2Q6PUV4 134 aaKnown RBP16.33■□□□□ 0.2
EPB42-210ENST00000622454 NFXL1Q6ZNB6 911 aa16.33■□□□□ 0.2
EPB42-210ENST00000622454 ZBTB43O43298 467 aa16.32■□□□□ 0.2
EPB42-210ENST00000622454 CCDC192P0DO97 292 aa16.32■□□□□ 0.2
EPB42-210ENST00000622454 TM4SF1P30408 202 aa16.32■□□□□ 0.2
EPB42-210ENST00000622454 HS1BP3Q53T59 392 aa16.32■□□□□ 0.2
EPB42-210ENST00000622454 ILDR1Q86SU0 546 aaPredicted RBP16.32■□□□□ 0.2
EPB42-210ENST00000622454 USP28Q96RU2 1077 aa16.32■□□□□ 0.2
EPB42-210ENST00000622454 RNF41Q9H4P4 317 aaPredicted RBP16.32■□□□□ 0.2
EPB42-210ENST00000622454 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
EPB42-210ENST00000622454 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
EPB42-210ENST00000622454 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
EPB42-210ENST00000622454 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
EPB42-210ENST00000622454 SENP2Q9HC62 589 aa16.31■□□□□ 0.2
EPB42-210ENST00000622454 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
EPB42-210ENST00000622454 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
EPB42-210ENST00000622454 SART3Q15020 963 aaKnown RBP16.31■□□□□ 0.2
EPB42-210ENST00000622454 MICU3Q86XE3 530 aa16.31■□□□□ 0.2
EPB42-210ENST00000622454 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
EPB42-210ENST00000622454 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
EPB42-210ENST00000622454 TNMDQ9H2S6 317 aa16.31■□□□□ 0.2
EPB42-210ENST00000622454 KLRK1P26718 216 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 CLCN1P35523 988 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 PPARAQ07869 468 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 NFIXQ14938 502 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 CAMK4Q16566 473 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 SDR42E1Q8WUS8 393 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 TOMM22Q9NS69 142 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 NR1I2O75469 434 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 RXRAP19793 462 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
EPB42-210ENST00000622454 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 BRAPQ7Z569 592 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 FTOQ9C0B1 505 aaKnown RBP eCLIP16.3■□□□□ 0.2
EPB42-210ENST00000622454 CLSTN2Q9H4D0 955 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
EPB42-210ENST00000622454 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 CDC27P30260 824 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 SYNE3Q6ZMZ3 975 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 CNBD1Q8NA66 436 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 ERICH2A1L162 156 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
EPB42-210ENST00000622454 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 PROM2Q8N271 834 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 TMTC2Q8N394 836 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 TFCP2L1Q9NZI6 479 aa16.29■□□□□ 0.2
EPB42-210ENST00000622454 MAST2Q6P0Q8 1798 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms